RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 COL6A2P12110 1019 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ALOX12P18054 663 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 EDNRBP24530 442 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SOX6P35712 828 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MTIF2P46199 727 aaKnown RBP6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MNAT1P51948 309 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SLC26A5P58743 744 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RAB1AP62820 205 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PFKFB4Q16877 469 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ARL13BQ3SXY8 428 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RPUSD3Q6P087 351 aaKnown RBP6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SV2AQ7L0J3 742 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NME9Q86XW9 330 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FAM9CQ8IZT9 166 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PCSK9Q8NBP7 692 aaKnown RBP6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DAGLBQ8NCG7 672 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 COX4I2Q96KJ9 171 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 C16orf92Q96LL3 132 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 WDR24Q96S15 920 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 EYA3Q99504 573 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SORBS1Q9BX66 1292 aaKnown RBP6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 HDAC8Q9BY41 377 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 UNKQ9C0B0 810 aaKnown RBP6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZNF287Q9HBT7 754 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PPP1R14DQ9NXH3 145 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 IL1RAPL1Q9NZN1 696 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DPP7Q9UHL4 492 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 VPS28Q9UK41 221 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 OGDHLQ9ULD0 1010 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SRPK3Q9UPE1 567 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FAM135BQ49AJ0 1406 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 EDC4Q6P2E9 1401 aaKnown RBP6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NRXN3Q9Y4C0 1643 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 METP08581 1390 aa6.24□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SHISA3A0PJX4 238 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 BIN1O00499 593 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MAN2B1O00754 1011 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PLSCR1O15162 318 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ENDOD1O94919 500 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FSBPO95073 299 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FTLP02792 175 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 VEGFAP15692 232 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NOS3P29474 1203 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MSH2P43246 934 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MAP2K3P46734 347 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ALDH9A1P49189 494 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TUBP50607 506 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RPS6KA3P51812 740 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 BEX3Q00994 111 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 GALNT1Q10472 559 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NFIAQ12857 509 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PDIA5Q14554 519 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 EPHA7Q15375 998 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 STK11Q15831 433 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZACNQ401N2 412 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FCRLBQ6BAA4 426 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TADA2BQ86TJ2 420 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SUPT20HQ8NEM7 779 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZNF483Q8TF39 744 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DHX58Q96C10 678 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FNBP1Q96RU3 617 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PLVAPQ9BX97 442 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 GHITMQ9H3K2 345 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 KCNF1Q9H3M0 494 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ARMT1Q9H993 441 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ZMAT3Q9HA38 289 aaKnown RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SPON1Q9HCB6 807 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CCDC177Q9NQR7 707 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 KCNH7Q9NS40 1196 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 BTG4Q9NY30 223 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SLC13A4Q9UKG4 626 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PPIP5K1Q6PFW1 1433 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 KNDC1Q76NI1 1749 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DDX39AO00148 427 aaKnown RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DEAF1O75398 565 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SLC22A3O75751 556 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 NPPAP01160 153 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 RPSAP08865 295 aaKnown RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 PDHBP11177 359 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CKBP12277 381 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FGFR4P22455 802 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 SFPQP23246 707 aaKnown RBP eCLIP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CCNHP51946 323 aaPredicted RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 COG7P83436 770 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CDK17Q00537 523 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 AIMP1Q12904 312 aaKnown RBP6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 LAMB3Q13751 1172 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 DAG1Q14118 895 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 MPEG1Q2M385 716 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 C3orf36Q3SXR2 165 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FIGNQ5HY92 759 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TPGS2Q68CL5 300 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 FDX2Q6P4F2 183 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ARHGAP11AQ6P4F7 1023 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 CORO6Q6QEF8 472 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 ANKRD35Q8N283 1001 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 GALNT15Q8N3T1 639 aa6.23□□□□□ -1.41
ALMS1-IT1-201ENST00000441587 TMCO5AQ8N6Q1 288 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms