RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 ZNF669Q96BR6 464 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 NUDT12Q9BQG2 462 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 LRRC40Q9H9A6 602 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 NCAM2O15394 837 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 KCNA2P16389 499 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 PTPN4P29074 926 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 SLC15A2Q16348 729 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 MDH1BQ5I0G3 518 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 WASHC2DQ5SRD0 308 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 DTX3LQ8TDB6 740 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 KIF17Q9P2E2 1029 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 HEY2Q9UBP5 337 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 MARCOQ9UEW3 520 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 TARSP26639 723 aaKnown RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 DSG3P32926 999 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 STX5Q13190 355 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 CAPRIN1Q14444 709 aaKnown RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 MROH9Q5TGP6 573 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 CDC26Q8NHZ8 85 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 KLF6Q99612 283 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 TEX12Q9BXU0 123 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 DCLRE1BQ9H816 532 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 RIC8BQ9NVN3 520 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 E7ENQ6 273 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 CYP1A2P05177 515 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 THRAP10827 490 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 ODC1P11926 461 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 DSG1Q02413 1049 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 PTPN11Q06124 597 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 IL17AQ16552 155 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 FAM83EQ2M2I3 478 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 C16orf87Q6PH81 154 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-203ENST00000441123 DNAJC19Q96DA6 116 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 PCYOX1Q9UHG3 505 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 TAGLN3Q9UI15 199 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 NAALADL1Q9UQQ1 740 aa13.38□□□□□ -0.27
BRPF3-203ENST00000441123 NFIBO00712 420 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 DYNC1LI2O43237 492 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 SYCP2LQ5T4T6 812 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ASIC4Q96FT7 647 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 SPON2Q9BUD6 331 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 NDUFA13Q9P0J0 144 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 WARS2Q9UGM6 360 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 FSBPO95073 299 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 HOXC6P09630 235 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 APOBEC3HQ6NTF7 200 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 JADE3Q92613 823 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 BRD8Q9H0E9 1235 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 SARS2Q9NP81 518 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ACTL7BQ9Y614 415 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ENO3P13929 434 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 TSHRP16473 764 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 HMOX2P30519 316 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 PRKAA2P54646 552 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 CRYMQ14894 314 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 RFX8Q6ZV50 586 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ZNF555Q8NEP9 628 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 BAP1Q92560 729 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ABCC6O95255 1503 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 NEMP1O14524 444 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ZNF263O14978 683 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 HNRNPRO43390 633 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 CDH2P19022 906 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ADRM1Q16186 407 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 ZCCHC9Q8N567 271 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 FAM172AQ8WUF8 416 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 NDFIP2Q9NV92 336 aa13.37□□□□□ -0.27
BRPF3-203ENST00000441123 STX18Q9P2W9 335 aaKnown RBP13.37□□□□□ -0.27
BRPF3-203ENST00000441123 NDUFS3O75489 264 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 FAM153BP0C7A2 387 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 EIF4BP23588 611 aaKnown RBP13.36□□□□□ -0.27
BRPF3-203ENST00000441123 NFIL3Q16649 462 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 SLFN11Q7Z7L1 901 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 AGR3Q8TD06 166 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 HDAC7Q8WUI4 952 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 DDX4Q9NQI0 724 aaKnown RBP13.36□□□□□ -0.27
BRPF3-203ENST00000441123 FAM153AQ9UHL3 310 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
BRPF3-203ENST00000441123 PSMD10O75832 226 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 PYGMP11217 842 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 AGAP9Q5VTM2 703 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
BRPF3-203ENST00000441123 HAS1Q92839 578 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms