RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 PCK1P35558 622 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SOX4Q06945 474 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 TRIM32Q13049 653 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 CYB5D1Q6P9G0 228 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 TMC3Q7Z5M5 1100 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 GSTCDQ8NEC7 633 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SPATA18Q8TC71 538 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SH3GL3Q99963 347 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 C11orf84Q9BUA3 381 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SPTLC1O15269 473 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 GJB6O95452 261 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 ARSEP51690 589 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 UAP1Q16222 522 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 TTMPQ5BVD1 217 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 RHBDF2Q6PJF5 856 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 CYP4V2Q6ZWL3 525 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 RSPH3Q86UC2 560 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 PXYLP1Q8TE99 480 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 FRMD8P1Q9BZ68 369 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 TJP2Q9UDY2 1190 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 HES2Q9Y543 173 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 GABRDO14764 452 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 DAPK3O43293 454 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 ZNF623O75123 536 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 CABYRO75952 493 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 IVDP26440 423 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 PTK7Q13308 1070 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SV2CQ496J9 727 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 THEMIS2Q5TEJ8 643 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 CYP4F22Q6NT55 531 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 MAGOHBQ96A72 148 aaKnown RBP13.85□□□□□ -0.19
ACTN4-204ENST00000440400 TRIM51Q9BSJ1 452 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 SPC25Q9HBM1 224 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 WHRNQ9P202 907 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 PARP2Q9UGN5 583 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 TSPAN16Q9UKR8 245 aa13.85□□□□□ -0.19
ACTN4-204ENST00000440400 ZNF487B1APH4 448 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 UPP2O95045 317 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
ACTN4-204ENST00000440400 SF3A3Q12874 501 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■■□ 23.1
ACTN4-204ENST00000440400 CYP4A22Q5TCH4 519 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 OLFML1Q6UWY5 402 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 TTC30AQ86WT1 665 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 JOSD2Q8TAC2 188 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.19
ACTN4-204ENST00000440400 XPNPEP3Q9NQH7 507 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 NLRC5Q86WI3 1866 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 hCG_1818297A0A087WSY0 165 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 FAM170AA1A519 330 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 C2CD4BA6NLJ0 364 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 F8VP50 259 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 M0QYV0 167 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 LRCH4O75427 683 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 GABBR2O75899 941 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 FGFR1P11362 822 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 KRT3P12035 628 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 TCF4P15884 667 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 PAX3P23760 479 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 CDKN2BP42772 138 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 ZNF143P52747 638 aaPredicted RBP13.84□□□□□ -0.19
ACTN4-204ENST00000440400 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
ACTN4-204ENST00000440400 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 HEXIM2Q96MH2 286 aaKnown RBP13.84□□□□□ -0.19
ACTN4-204ENST00000440400 TSEN34Q9BSV6 310 aaKnown RBP13.84□□□□□ -0.19
ACTN4-204ENST00000440400 OSBPL8Q9BZF1 889 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 EPB41L4BQ9H329 900 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 SRRDQ9UH36 339 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 GIT1Q9Y2X7 761 aa13.84□□□□□ -0.19
ACTN4-204ENST00000440400 KPNA7A9QM74 516 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 GOLGA8KD6RF30 607 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 KRT14P02533 472 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 CD19P15391 556 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 AKAP5P24588 427 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.19
ACTN4-204ENST00000440400 TAF6P49848 677 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 PSMC1P62191 440 aaKnown RBP13.83□□□□□ -0.19
ACTN4-204ENST00000440400 SP3Q02447 781 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 CBLBQ13191 982 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 PPP1R26Q5T8A7 1209 aaPredicted RBP13.83□□□□□ -0.19
ACTN4-204ENST00000440400 TRNP1Q6NT89 227 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 TLDC1Q6P9B6 456 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 SPOCD1Q6ZMY3 1216 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 FUKQ8N0W3 1084 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 CMASQ8NFW8 434 aaPredicted RBP13.83□□□□□ -0.19
ACTN4-204ENST00000440400 GRK7Q8WTQ7 553 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 ZNF473Q8WTR7 871 aaKnown RBP13.83□□□□□ -0.19
ACTN4-204ENST00000440400 IFT81Q8WYA0 676 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 LRRC45Q96CN5 670 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 ZIM3Q96PE6 472 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 RUFY1Q96T51 708 aa13.83□□□□□ -0.19
ACTN4-204ENST00000440400 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms