RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-202ENST00000439706 PCDHGB4Q9UN71 923 aa12.97□□□□□ -0.33
SLC38A1-202ENST00000439706 PCDHGB5Q9Y5G0 923 aa12.97□□□□□ -0.33
SLC38A1-202ENST00000439706 CXorf49A8MYA2 514 aaPredicted RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 H7C0C1 242 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 TCN1P20061 433 aaPredicted RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 PSMA2P25787 234 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 ATP5OP48047 213 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 NLRP11P59045 1033 aaKnown RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 MMRN1Q13201 1228 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 MORF4L2Q15014 288 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 LDHDQ86WU2 507 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 HPS6Q86YV9 775 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 SLC9A9Q8IVB4 645 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 HACE1Q8IYU2 909 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 NDUFAF2Q8N183 169 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 CNBD2Q96M20 576 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 WDR83Q9BRX9 315 aaKnown RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 GRIP2Q9C0E4 1043 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 SLC9A2Q9UBY0 812 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 TRAFD1O14545 582 aaPredicted RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 ECE2O60344 883 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 APRTP07741 180 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 DYNC1I2Q13409 638 aaKnown RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 HIC1Q14526 733 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 TMEM179Q6ZVK1 233 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 KCTD6Q8NC69 237 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 GDPD5Q8WTR4 605 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 E2F7Q96AV8 911 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 PHACTR1Q9C0D0 580 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 DMAP1Q9NPF5 467 aaPredicted RBP12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 RAB6BQ9NRW1 208 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 FAM198AQ9UFP1 575 aa12.96□□□□□ -0.33
SLC38A1-202ENST00000439706 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.34
SLC38A1-202ENST00000439706 MAGEB3O15480 346 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 RBP3P10745 1247 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 NT5C2P49902 561 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 CYP24A1Q07973 514 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 MTMR1Q13613 665 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 CDAN1Q8IWY9 1227 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 SKA1Q96BD8 255 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 TRAPPC9Q96Q05 1148 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 NYAP2Q9P242 653 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 PTPRJQ12913 1337 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 SPATA31A6Q5VVP1 1343 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 IQANK1A0A1B0GTG1 560 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 GRIA2P42262 883 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 RPL10AP62906 217 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 CRADDP78560 199 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 GK3PQ14409 553 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 MON1BQ7L1V2 547 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 KATNAL2Q8IYT4 538 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 RCOR2Q8IZ40 523 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 UNC5BQ8IZJ1 945 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 OR6Y1Q8NGX8 325 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 DCAKDQ8WVC6 231 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 TIPINQ9BVW5 301 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 PARVAQ9NVD7 372 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 SLC24A2Q9UI40 661 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 ABHD2P08910 425 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 CYTH1Q15438 398 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 TFDP3Q5H9I0 405 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 MARK2Q7KZI7 788 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 CRLF3Q8IUI8 442 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 PGBD4Q96DM1 585 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 ERLEC1Q96DZ1 483 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 IFT43Q96FT9 208 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 KLHL4Q9C0H6 718 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 VPS11Q9H270 941 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 ADAMTS6Q9UKP5 1117 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
SLC38A1-202ENST00000439706 PSTPIP1O43586 416 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 ZNF862O60290 1169 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 RFC1P35251 1148 aaPredicted RBP12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 GPC3P51654 580 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 NOMO3P69849 1222 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 MTERF2Q49AM1 385 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 EFHC2Q5JST6 749 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 TDRD10Q5VZ19 366 aaKnown RBP12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 SLC39A4Q6P5W5 647 aa12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 RBM44Q6ZP01 1051 aaKnown RBP12.94□□□□□ -0.34
SLC38A1-202ENST00000439706 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms