RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SMYD3Q9H7B4 428 aa21.65■■□□□ 1.06
NCKIPSD-206ENST00000439518 TRAF3IP3Q9Y228 551 aa21.65■■□□□ 1.06
NCKIPSD-206ENST00000439518 ANAPC1Q9H1A4 1944 aa21.65■■□□□ 1.06
NCKIPSD-206ENST00000439518 F8VP50 259 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 PAPSS2O95340 614 aaPredicted RBP21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 CKMP06732 381 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 ARSAP15289 507 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 ANXA13P27216 316 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 CACNA2D1P54289 1103 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 CDH8P55286 799 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 NOP14P78316 857 aaKnown RBP21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 USP4Q13107 963 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 MTF1Q14872 753 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 PDGFRLQ15198 375 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZNF699Q32M78 642 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZACNQ401N2 412 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 CC2D1AQ6P1N0 951 aaPredicted RBP21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 KRBA2Q6ZNG9 492 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 SYNPOQ8N3V7 929 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 B3GNT5Q9BYG0 378 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZNF518BQ9C0D4 1074 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 ELOVL4Q9GZR5 314 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 GOLPH3LQ9H4A5 285 aa21.64■■□□□ 1.05
NCKIPSD-206ENST00000439518 TCF3P15923 654 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 HDCP19113 662 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZNF667Q5HYK9 610 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 TMEM196Q5HYL7 178 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 C1orf220Q5T0J3 134 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 DCLK2Q8N568 766 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 ELMO3Q96BJ8 720 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 EHD2Q9NZN4 543 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 TRPM5Q9NZQ8 1165 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 ARHGAP26Q9UNA1 814 aa21.63■■□□□ 1.05
NCKIPSD-206ENST00000439518 K7ESF4 209 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 CLDN5O00501 218 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 TRDMT1O14717 391 aaKnown RBP21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 IKBKBO14920 756 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 CALUO43852 315 aaPredicted RBP21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 PFKLP17858 780 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 KCNB1Q14721 858 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 NFIL3Q16649 462 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 SV2AQ7L0J3 742 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 SH3RF2Q8TEC5 729 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 OSCP1Q8WVF1 389 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 CCDC47Q96A33 483 aaKnown RBP21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 SDCBP2Q9H190 292 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 C2orf42Q9NWW7 574 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 SMG5Q9UPR3 1016 aaKnown RBP21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 FRMD4BQ9Y2L6 1034 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 CACNA1AO00555 2505 aa21.62■■□□□ 1.05
NCKIPSD-206ENST00000439518 DCHS1Q96JQ0 3298 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZNF840PA6NDX5 716 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 MAPK13O15264 365 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZNF202O95125 648 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 KIF20AO95235 890 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 RAP1GAPP47736 663 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 PPP3CCP48454 512 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 PDE6CP51160 858 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 ZXDBP98169 803 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 SGSM1Q2NKQ1 1148 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 CEP135Q66GS9 1140 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 FSTL4Q6MZW2 842 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 TAF4BQ92750 862 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 HINFPQ9BQA5 517 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 GDPD2Q9HCC8 539 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 DUS2Q9NX74 493 aaKnown RBP21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 WNT6Q9Y6F9 365 aa21.61■■□□□ 1.05
NCKIPSD-206ENST00000439518 ASS1P00966 412 aaKnown RBP21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 HOXA6P31267 233 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 AMPD2Q01433 879 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 DMWDQ09019 674 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 GRSF1Q12849 480 aaKnown RBP eCLIP21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 SCARA5Q6ZMJ2 495 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 PAQR9Q6ZVX9 377 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 KIAA2013Q8IYS2 634 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 GUF1Q8N442 669 aaKnown RBP21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 ATP2A3Q93084 1043 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 ECT2Q9H8V3 914 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 FBRSL1Q9HCM7 1045 aaKnown RBP21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 MAPK8IP1Q9UQF2 711 aa21.6■■□□□ 1.05
NCKIPSD-206ENST00000439518 AKAP3O75969 853 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 OLFM2O95897 454 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 P4HA1P13674 534 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 NR2F2P24468 414 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 GJA4P35212 333 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 VAMP7P51809 220 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 TAF10Q12962 218 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 EML3Q32P44 896 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 FAM35AQ86V20 835 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 CPA6Q8N4T0 437 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 TNIP3Q96KP6 325 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 RNF38Q9H0F5 515 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 LINC00597Q9H2U6 94 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 NCDNQ9UBB6 729 aa21.59■■□□□ 1.05
NCKIPSD-206ENST00000439518 CHURC1-FNTBB4DL54 471 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 HLA-DRAP01903 254 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 ID4P47928 161 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 IFNAR2P48551 515 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 FNTBP49356 437 aa21.58■■□□□ 1.05
NCKIPSD-206ENST00000439518 GALK1P51570 392 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms