RNA–Protein interactions for RNA: ENST00000434070.5

HDAC7-212, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-212ENST00000434070 B3GNT5Q9BYG0 378 aa19■□□□□ 0.63
HDAC7-212ENST00000434070 ZNF518BQ9C0D4 1074 aa19■□□□□ 0.63
HDAC7-212ENST00000434070 KCTD10Q9H3F6 313 aa19■□□□□ 0.63
HDAC7-212ENST00000434070 DUS2Q9NX74 493 aaKnown RBP19■□□□□ 0.63
HDAC7-212ENST00000434070 HPSEQ9Y251 543 aa19■□□□□ 0.63
HDAC7-212ENST00000434070 TRIM66O15016 1216 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 HRO43593 1189 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 FAM163BP0C2L3 166 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 ATICP31939 592 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 NDUFA8P51970 172 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 KRT85P78386 507 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 GRSF1Q12849 480 aaKnown RBP eCLIP18.99■□□□□ 0.63
HDAC7-212ENST00000434070 USP4Q13107 963 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 PSMD2Q13200 908 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 SCARA5Q6ZMJ2 495 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 PRR23BQ6ZRT6 265 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 OSCP1Q8WVF1 389 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 LINC00597Q9H2U6 94 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 POLR3BQ9NW08 1133 aaPredicted RBP18.99■□□□□ 0.63
HDAC7-212ENST00000434070 TRPM5Q9NZQ8 1165 aa18.99■□□□□ 0.63
HDAC7-212ENST00000434070 TRDMT1O14717 391 aaKnown RBP18.98■□□□□ 0.63
HDAC7-212ENST00000434070 PAPSS2O95340 614 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-212ENST00000434070 VNN1O95497 513 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 EGFP01133 1207 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 C4BPAP04003 597 aaKnown RBP18.98■□□□□ 0.63
HDAC7-212ENST00000434070 NR3C1P04150 777 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 RPN1P04843 607 aaKnown RBP18.98■□□□□ 0.63
HDAC7-212ENST00000434070 PRR29P0C7W0 189 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 GJA4P35212 333 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 IFNAR2P48551 515 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 GALK1P51570 392 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 ZXDBP98169 803 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 IFRD2Q12894 506 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-212ENST00000434070 NCOA4Q13772 614 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 ZNF699Q32M78 642 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 SLC9A9Q8IVB4 645 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 SYNPOQ8N3V7 929 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 CPA6Q8N4T0 437 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 B3GALNT2Q8NCR0 500 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 SECISBP2LQ93073 1101 aaKnown RBP18.98■□□□□ 0.63
HDAC7-212ENST00000434070 C8orf48Q96LL4 319 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 TTLL2Q9BWV7 592 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 SDCBP2Q9H190 292 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 ECT2Q9H8V3 914 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 USP25Q9UHP3 1055 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 RAB23Q9ULC3 237 aa18.98■□□□□ 0.63
HDAC7-212ENST00000434070 ZNF638Q14966 1978 aaKnown RBP18.97■□□□□ 0.63
HDAC7-212ENST00000434070 ZNF840PA6NDX5 716 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 ABL1P00519 1130 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 SYKP43405 635 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 PXNP49023 591 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-212ENST00000434070 NOP14P78316 857 aaKnown RBP18.97■□□□□ 0.63
HDAC7-212ENST00000434070 CLDN10P78369 228 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 SIM2Q14190 667 aaPredicted RBP18.97■□□□□ 0.63
HDAC7-212ENST00000434070 EML3Q32P44 896 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 LONP2Q86WA8 852 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 CEP295NLQ96MC4 621 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 P2RY13Q9BPV8 354 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 ELOVL4Q9GZR5 314 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 VRTNQ9H8Y1 702 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 PARD6AQ9NPB6 346 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 GMEB2Q9UKD1 530 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 USP18Q9UMW8 372 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 ARHGAP26Q9UNA1 814 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 CEP250Q9BV73 2442 aa18.97■□□□□ 0.63
HDAC7-212ENST00000434070 PDXKO00764 312 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 SCAMP3O14828 347 aaKnown RBP18.96■□□□□ 0.63
HDAC7-212ENST00000434070 RNF40O75150 1001 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 TGM1P22735 817 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 AP3M2P53677 418 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 AMPD2Q01433 879 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 TAF10Q12962 218 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 ORC1Q13415 861 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 RSPO4Q2I0M5 234 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-212ENST00000434070 CEP135Q66GS9 1140 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 ERMP1Q7Z2K6 904 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 ATP2A3Q93084 1043 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 KCNK16Q96T55 309 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 RNF38Q9H0F5 515 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.96■□□□□ 0.63
HDAC7-212ENST00000434070 SMPD4Q9NXE4 827 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 MAPK8IP1Q9UQF2 711 aa18.96■□□□□ 0.63
HDAC7-212ENST00000434070 LEFTY2O00292 366 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 FOXK2Q01167 660 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 SPEM2Q0P670 501 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 C1orf220Q5T0J3 134 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 LAIR1Q6GTX8 287 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 PAQR9Q6ZVX9 377 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 EZH1Q92800 747 aaPredicted RBP18.95■□□□□ 0.62
HDAC7-212ENST00000434070 MED10Q9BTT4 135 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 GOLPH3LQ9H4A5 285 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 EHD2Q9NZN4 543 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 GREB1Q4ZG55 1949 aa18.95■□□□□ 0.62
HDAC7-212ENST00000434070 PTPRDP23468 1912 aa18.94■□□□□ 0.62
HDAC7-212ENST00000434070 ANAPC1Q9H1A4 1944 aa18.94■□□□□ 0.62
HDAC7-212ENST00000434070 CACNA1AO00555 2505 aa18.94■□□□□ 0.62
HDAC7-212ENST00000434070 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
HDAC7-212ENST00000434070 MYL1P05976 194 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms