RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 EXTL3O43909 919 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 DTNBO60941 627 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 PRPF40AO75400 957 aaKnown RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 KRT37O76014 449 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 PRAMEF12O95522 483 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 NFATC1O95644 943 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 KRT18P05783 430 aaKnown RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 NFICP08651 508 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 SOX9P48436 509 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 ACOT2P49753 483 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 DGKEP52429 567 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 RBP5P82980 135 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 SPAG1Q07617 926 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 TNK2Q07912 1038 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 RAD51AP2Q09MP3 1159 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 KCNMA1Q12791 1236 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 LMAN2Q12907 356 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 MYO1EQ12965 1108 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 PSMD2Q13200 908 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 LPAL2Q16609 132 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 INTS6LQ5JSJ4 861 aaKnown RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 WSCD1Q658N2 575 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 LMBRD2Q68DH5 695 aaPredicted RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 RNF43Q68DV7 783 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 HEATR6Q6AI08 1181 aaKnown RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 MCTP1Q6DN14 999 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 SLC39A4Q6P5W5 647 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 CRELD2Q6UXH1 353 aaPredicted RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 RABEPKQ7Z6M1 372 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 KBTBD6Q86V97 674 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 DDX42Q86XP3 938 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDH13-203ENST00000431540 POMGNT1Q8WZA1 660 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 OTUB2Q96DC9 234 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 ZFYVE19Q96K21 471 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 ACCSQ96QU6 501 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 LPIN3Q9BQK8 851 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 EBF3Q9H4W6 596 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 COMMD8Q9NX08 183 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 DUS2Q9NX74 493 aaKnown RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 TBC1D14Q9P2M4 693 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 ARHGAP26Q9UNA1 814 aa8.89□□□□□ -0.99
CDH13-203ENST00000431540 R3HCC1Q9Y3T6 440 aaKnown RBP8.89□□□□□ -0.99
CDH13-203ENST00000431540 MYMKA6NI61 221 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 PPEF2O14830 753 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 KHNYNO15037 678 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 ALDH1A2O94788 518 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 CAVIN2O95810 425 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 HDCP19113 662 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 PDCP20941 246 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 ADSSP30520 456 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 RDXP35241 583 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 TNFRSF4P43489 277 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 IFNAR2P48551 515 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 NOP14P78316 857 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 SLC7A9P82251 487 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 DMC1Q14565 340 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 MTF1Q14872 753 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 ZRSR1Q15695 479 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 ZNF77Q15935 545 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 EML3Q32P44 896 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 L1TD1Q5T7N2 865 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 STXBP4Q6ZWJ1 553 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 SV2BQ7L1I2 683 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 BRSK2Q8IWQ3 736 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 ADGRG2Q8IZP9 1017 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 OVCA2Q8WZ82 227 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 CHFRQ96EP1 664 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 CNOT6LQ96LI5 555 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 PKMYT1Q99640 499 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 TTLL2Q9BWV7 592 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 DDX43Q9NXZ2 648 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 GCNT4Q9P109 453 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
CDH13-203ENST00000431540 FCF1Q9Y324 198 aaKnown RBP8.88□□□□□ -0.99
CDH13-203ENST00000431540 CFAP47Q6ZTR5 3102 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 FRMD3A2A2Y4 597 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 FAM221BA6H8Z2 402 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 OTOL1A6NHN0 477 aaPredicted RBP8.87□□□□□ -0.99
CDH13-203ENST00000431540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.87□□□□□ -0.99
CDH13-203ENST00000431540 ANKRD63C9JTQ0 380 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 H0Y626 953 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 TNFRSF10BO14763 440 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 TRIM66O15016 1216 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 TRIM16O95361 564 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 OLFM2O95897 454 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 EGFP01133 1207 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 PDIA4P13667 645 aaKnown RBP8.87□□□□□ -0.99
CDH13-203ENST00000431540 PLCG1P19174 1290 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 CYP4F8P98187 520 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 USP4Q13107 963 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 SRSF5Q13243 272 aaKnown RBP8.87□□□□□ -0.99
CDH13-203ENST00000431540 MCM6Q14566 821 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 E2F5Q15329 346 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 SNX30Q5VWJ9 437 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
CDH13-203ENST00000431540 PMS2CLQ68D20 193 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 TXNDC8Q6A555 127 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 SPATA2LQ8IUW3 424 aaPredicted RBP8.87□□□□□ -0.99
CDH13-203ENST00000431540 PDCL2Q8N4E4 241 aa8.87□□□□□ -0.99
CDH13-203ENST00000431540 TTC9BQ8N6N2 239 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms