RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 FSIP1Q8NA03 581 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 ELMO3Q96BJ8 720 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 PCED1BQ96HM7 432 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 FUBP3Q96I24 572 aaKnown RBP eCLIP17.69■□□□□ 0.42
VARS-216ENST00000428445 ZDHHC4Q9NPG8 344 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 TMEM30AQ9NV96 361 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 SMPD4Q9NXE4 827 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 CDH9Q9ULB4 789 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 CFAP47Q6ZTR5 3102 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 ZNF233A6NK53 670 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 GIPC1O14908 333 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 FOXD2O60548 495 aaPredicted RBP17.68■□□□□ 0.42
VARS-216ENST00000428445 AKAP3O75969 853 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 KCNK5O95279 499 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 TNNC2P02585 160 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 HNRNPLP14866 589 aaKnown RBP eCLIP17.68■□□□□ 0.42
VARS-216ENST00000428445 BCKDHBP21953 392 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 PMLP29590 882 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 MAGEA11P43364 429 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 IFRD2Q12894 506 aaPredicted RBP17.68■□□□□ 0.42
VARS-216ENST00000428445 MYO1EQ12965 1108 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 DUOXA2Q1HG44 320 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 RNF43Q68DV7 783 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 C4orf50Q6ZRC1 276 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 HS2ST1Q7LGA3 356 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 USP33Q8TEY7 942 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 LSM14BQ9BX40 385 aaKnown RBP17.68■□□□□ 0.42
VARS-216ENST00000428445 DPEP3Q9H4B8 488 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 HSPBP1Q9NZL4 362 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 EBF1Q9UH73 591 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 RALYQ9UKM9 306 aaKnown RBP17.68■□□□□ 0.42
VARS-216ENST00000428445 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 R3HCC1Q9Y3T6 440 aaKnown RBP17.68■□□□□ 0.42
VARS-216ENST00000428445 PCDHGA5Q9Y5G8 931 aa17.68■□□□□ 0.42
VARS-216ENST00000428445 MORC2Q9Y6X9 1032 aaPredicted RBP17.68■□□□□ 0.42
VARS-216ENST00000428445 C4orf47A7E2U8 309 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 PATE3B3GLJ2 98 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 F8VP50 259 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 CLDN5O00501 218 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 CLIC2O15247 247 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 CAVIN2O95810 425 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 DLATP10515 647 aaKnown RBP17.67■□□□□ 0.42
VARS-216ENST00000428445 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
VARS-216ENST00000428445 CASP1P29466 404 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 NR1H3Q13133 447 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 ALCAMQ13740 583 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 EMC10Q5UCC4 262 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 ANO7Q6IWH7 933 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 PSAPL1Q6NUJ1 521 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 DENND5BQ6ZUT9 1274 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 DPH6Q7L8W6 267 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 CCDC65Q8IXS2 484 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 FRMD1Q8N878 549 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 TSTD1Q8NFU3 115 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
VARS-216ENST00000428445 SPATA17Q96L03 361 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 TRPM5Q9NZQ8 1165 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 TFIP11Q9UBB9 837 aaKnown RBP17.67■□□□□ 0.42
VARS-216ENST00000428445 MTMR6Q9Y217 621 aa17.67■□□□□ 0.42
VARS-216ENST00000428445 FRYQ5TBA9 3013 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 BCLAF3A2AJT9 711 aaKnown RBP17.66■□□□□ 0.42
VARS-216ENST00000428445 ZNF840PA6NDX5 716 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 TGFB1I1O43294 461 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 RHOBTB1O94844 696 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 CYP17A1P05093 508 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 GNL1P36915 607 aaPredicted RBP17.66■□□□□ 0.42
VARS-216ENST00000428445 ELF2Q15723 593 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 VSTM1Q6UX27 236 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 TMEM92Q6UXU6 159 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 C12orf40Q86WS4 652 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 NELFCDQ8IXH7 590 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 ADGRG2Q8IZP9 1017 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 OR6B3Q8NGW1 331 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 MYCBPAPQ8TBZ2 947 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 SPATA18Q8TC71 538 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 RLN3Q8WXF3 142 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 ZNF516Q92618 1163 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 CCDC127Q96BQ5 260 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 EDEM2Q9BV94 578 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 ANGPTL2Q9UKU9 493 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 CPQQ9Y646 472 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 USP24Q9UPU5 2620 aa17.66■□□□□ 0.42
VARS-216ENST00000428445 MYO18AQ92614 2054 aaKnown RBP17.65■□□□□ 0.42
VARS-216ENST00000428445 NFATC1O95644 943 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 TCF3P15923 654 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 TNNI1P19237 187 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 ANXA13P27216 316 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 TIE1P35590 1138 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 CYP2J2P51589 502 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 TAF10Q12962 218 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 MDGA1Q8NFP4 955 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 EXOC4Q96A65 974 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 ACDQ96AP0 544 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 ZNF518BQ9C0D4 1074 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 SNX25Q9H3E2 840 aa17.65■□□□□ 0.42
VARS-216ENST00000428445 GON4LQ3T8J9 2241 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms