RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 BEST1O76090 585 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 ADCY5O95622 1261 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 PTPN2P17706 415 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 CASP14P31944 242 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 PDE4CQ08493 712 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 BST2Q10589 180 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 MEA1Q16626 185 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 PKDCCQ504Y2 493 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 DENND1BQ6P3S1 775 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 GRASPQ7Z6J2 395 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 ZNF677Q86XU0 584 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 NUP93Q8N1F7 819 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 SMRP1Q8NCR6 262 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 STKLD1Q8NE28 680 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 ZMIZ2Q8NF64 920 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 FEZF2Q8TBJ5 459 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 EPS8L1Q8TE68 723 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 PSMG2Q969U7 264 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 PRDM6Q9NQX0 595 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 DNMT3BQ9UBC3 853 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 PCDHGC3Q9UN70 934 aa13.6□□□□□ -0.23
CCHCR1-205ENST00000428174 XPO1O14980 1071 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 CFHP08603 1231 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 MTHFRP42898 656 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 MTMR3Q13615 1198 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 LEXMQ3ZCV2 418 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 TAF3Q5VWG9 929 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 IRF2BP2Q7Z5L9 587 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 NOP9Q86U38 636 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 PIGZQ86VD9 579 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 HS6ST3Q8IZP7 471 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 DDX1Q92499 740 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 CORO1BQ9BR76 489 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 UBXN6Q9BZV1 441 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 PNPLA8Q9NP80 782 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 ASAH2Q9NR71 780 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 HCFC1R1Q9NWW0 138 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 EHD2Q9NZN4 543 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 NOCTQ9UK39 431 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 MAGED2Q9UNF1 606 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 CEP83Q9Y592 693 aa13.59□□□□□ -0.23
CCHCR1-205ENST00000428174 PTPRDP23468 1912 aa13.58□□□□□ -0.23
CCHCR1-205ENST00000428174 GRXCR2A6NFK2 248 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 HHLA1C9JL84 531 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 TULP2O00295 520 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 TNFRSF10BO14763 440 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 MBTPS2O43462 519 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 RHOP08100 348 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 MMEP08473 750 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 MYL4P12829 197 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 PRKCIP41743 596 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 GPD2P43304 727 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 PLA2G4AP47712 749 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 SLC5A3P53794 718 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 NTHL1P78549 312 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 CDR2Q01850 454 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 IFRD2Q12894 506 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 TBX2Q13207 712 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 TSR1Q2NL82 804 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 PABPC1LQ4VXU2 614 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 PDZD4Q76G19 769 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 LEMD2Q8NC56 503 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 SLC20A1Q8WUM9 679 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 SLC35F5Q8WV83 523 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 SYN2Q92777 582 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 NECTIN4Q96NY8 510 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 LHX5Q9H2C1 402 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 ZNF334Q9HCZ1 680 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 COMMD8Q9NX08 183 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 THEGQ9P2T0 379 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 UXTQ9UBK9 157 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 CDH22Q9UJ99 828 aa13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 USP15Q9Y4E8 981 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-205ENST00000428174 AKR1B15C9JRZ8 316 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 ZNF197O14709 1029 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 CHRNB2P17787 502 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 YWHAQP27348 245 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 CDC25BP30305 580 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 RGS7P49802 495 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 EPHA5P54756 1037 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 USP46P62068 366 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 KLHL30Q0D2K2 578 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 GPRIN1Q7Z2K8 1008 aa13.57□□□□□ -0.24
CCHCR1-205ENST00000428174 TMC8Q8IU68 726 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms