RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 FAM237BA0A1B0GVD1 139 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 INO80B-WBP1J3KQ70 363 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 ADCY3O60266 1144 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 LDHAP00338 332 aaKnown RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 PTPRAP18433 802 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 PCK1P35558 622 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 MCL1Q07820 350 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 AGGF1Q8N302 714 aaeCLIP15.04■□□□□ -0
ERCC3-202ENST00000426778 UBR7Q8N806 425 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 PEBP4Q96S96 227 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 CADM1Q9BY67 442 aaKnown RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 TRIM6Q9C030 488 aaPredicted RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 INO80BQ9C086 356 aaPredicted RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 SDCBP2Q9H190 292 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 PICK1Q9NRD5 415 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 RNF19AQ9NV58 838 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 MGAMO43451 1857 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 TCRBV9S1A1TA0A576 114 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 CYB561D2O14569 222 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 MSCO60682 206 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 MT-ND3P03897 115 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 CALB2P22676 271 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 TCF7P36402 384 aaPredicted RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 SKIV2L2P42285 1042 aaKnown RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 PTDSS1P48651 473 aaKnown RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 TUBP50607 506 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 CCDC142Q17RM4 750 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 DUOXA2Q1HG44 320 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 SCYL2Q6P3W7 929 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 DARS2Q6PI48 645 aaKnown RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 ALYREFQ86V81 257 aaKnown RBP15.04■□□□□ -0
ERCC3-202ENST00000426778 SCYL3Q8IZE3 742 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 PDIK1LQ8N165 341 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 PPM1NQ8N819 430 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 FBXO27Q8NI29 283 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 STK32AQ8WU08 396 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 TSSK1BQ9BXA7 367 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 MAGEB5Q9BZ81 275 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 YIPF3Q9GZM5 350 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 NFASCO94856 1347 aa15.04■□□□□ -0
ERCC3-202ENST00000426778 H0YCG3 227 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 MAFGO15525 162 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 FAM189A1O60320 539 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 STXBP2Q15833 593 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 CTC1Q2NKJ3 1217 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 MAB21L3Q8N8X9 362 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 BANPQ8N9N5 519 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 MZB1Q8WU39 189 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 TMEM120AQ9BXJ8 343 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 ACSS3Q9H6R3 686 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 CYLDQ9NQC7 956 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.03■□□□□ -0
ERCC3-202ENST00000426778 PIH1D1Q9NWS0 290 aaKnown RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 SLC24A2Q9UI40 661 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 CXorf49A8MYA2 514 aaPredicted RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 KRT36O76013 467 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 PRKCBP05771 671 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 GNAZP19086 355 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 PHBP35232 272 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 RGS7P49802 495 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 STAT5BP51692 787 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 CCNHP51946 323 aaPredicted RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 DRICH1Q6PGQ1 229 aaPredicted RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 ADGRD1Q6QNK2 874 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 JDP2Q8WYK2 163 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 OSBPL1AQ9BXW6 950 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 ENO4A6NNW6 628 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 H7C0C1 242 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 MAP3K13O43283 966 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 HOXC6P09630 235 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 TROVE2P10155 538 aaKnown RBP eCLIP15.03■□□□□ -0
ERCC3-202ENST00000426778 ATP5OP48047 213 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 CDH6P55285 790 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 DPYSL3Q14195 570 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 KPNB1Q14974 876 aaKnown RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 FAM102AQ5T9C2 384 aaPredicted RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 NAIF1Q69YI7 327 aaPredicted RBP15.03■□□□□ -0
ERCC3-202ENST00000426778 RINLQ6ZS11 566 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 FOXP3Q9BZS1 431 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 XYLT2Q9H1B5 865 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 IKBKGQ9Y6K9 419 aa15.03■□□□□ -0
ERCC3-202ENST00000426778 EVPLQ92817 2033 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 ZWINTO95229 277 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 MYL2P10916 166 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 GCKP35557 465 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 ARFIP2P53365 341 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 IGBP1P78318 339 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 LAMTOR4Q0VGL1 99 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 WDR49Q8IV35 697 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 MTMR14Q8NCE2 650 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 WDR60Q8WVS4 1066 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 MINDY3Q9H8M7 445 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 DDX56Q9NY93 547 aaKnown RBP15.02■□□□□ -0
ERCC3-202ENST00000426778 SENP1Q9P0U3 644 aa15.02■□□□□ -0
ERCC3-202ENST00000426778 SPDYE16A6NNV3 312 aaPredicted RBP15.02□□□□□ -0.01
ERCC3-202ENST00000426778 M0QYV0 167 aa15.02□□□□□ -0.01
ERCC3-202ENST00000426778 C2CD2LO14523 706 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms