RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 HADHQ16836 314 aaKnown RBP27.86■■■□□ 2.05
LDB1-202ENST00000425280 CCDC142Q17RM4 750 aa27.86■■■□□ 2.05
LDB1-202ENST00000425280 ZNF598Q86UK7 904 aaKnown RBP27.86■■■□□ 2.05
LDB1-202ENST00000425280 SCUBE3Q8IX30 993 aa27.86■■■□□ 2.05
LDB1-202ENST00000425280 ZWILCHQ9H900 591 aa27.86■■■□□ 2.05
LDB1-202ENST00000425280 UBN1Q9NPG3 1134 aa27.86■■■□□ 2.05
LDB1-202ENST00000425280 ASNSD1Q9NWL6 643 aa27.86■■■□□ 2.05
LDB1-202ENST00000425280 KBTBD13C9JR72 458 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 PTPN1P18031 435 aaKnown RBP27.85■■■□□ 2.05
LDB1-202ENST00000425280 FLT3P36888 993 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 RPL34P49207 117 aaKnown RBP27.85■■■□□ 2.05
LDB1-202ENST00000425280 GPS2Q13227 327 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 SLCO2A1Q92959 643 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 HNRNPABQ99729 332 aaKnown RBP27.85■■■□□ 2.05
LDB1-202ENST00000425280 CNPY3Q9BT09 278 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 PTPN22Q9Y2R2 807 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 KRT7P08729 469 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 KRT10P13645 584 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 PDGFRAP16234 1089 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 OAS2P29728 719 aaKnown RBP27.85■■■□□ 2.05
LDB1-202ENST00000425280 PTPN7P35236 360 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 AARSP49588 968 aaKnown RBP eCLIP27.85■■■□□ 2.05
LDB1-202ENST00000425280 DRG2P55039 364 aaKnown RBP27.85■■■□□ 2.05
LDB1-202ENST00000425280 ADCY2Q08462 1091 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 TAF5Q15542 800 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 TMEM86AQ8N2M4 240 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 MREGQ8N565 214 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 KHSRPQ92945 711 aaKnown RBP eCLIP27.85■■■□□ 2.05
LDB1-202ENST00000425280 B3GNT5Q9BYG0 378 aa27.85■■■□□ 2.05
LDB1-202ENST00000425280 TDRD15B5MCY1 1934 aaKnown RBP27.84■■■□□ 2.05
LDB1-202ENST00000425280 LRRD1A4D1F6 860 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 RNF8O76064 485 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 MIPP30301 263 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 GRIK3Q13003 919 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 ODF2Q5BJF6 829 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 KIAA0319Q5VV43 1072 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 DSTYKQ6XUX3 929 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 RTN4RL1Q86UN2 441 aaPredicted RBP27.84■■■□□ 2.05
LDB1-202ENST00000425280 FUKQ8N0W3 1084 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 RGS18Q9NS28 235 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 DDX43Q9NXZ2 648 aaKnown RBP27.84■■■□□ 2.05
LDB1-202ENST00000425280 INPP5FQ9Y2H2 1132 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 SNX24Q9Y343 169 aa27.84■■■□□ 2.05
LDB1-202ENST00000425280 C3orf70A6NLC5 250 aaPredicted RBP27.83■■■□□ 2.05
LDB1-202ENST00000425280 ECEL1O95672 775 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 CDKN2BP42772 138 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 SMTNL2Q2TAL5 461 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 KAZNQ674X7 775 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 ZDHHC17Q8IUH5 632 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 CYLDQ9NQC7 956 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 HOMER3Q9NSC5 361 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 PCSK1NQ9UHG2 260 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 TIMM13Q9Y5L4 95 aaPredicted RBP27.83■■■□□ 2.05
LDB1-202ENST00000425280 hCG_1818297A0A087WSY0 165 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 KCNT1Q5JUK3 1230 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 SH3PXD2AQ5TCZ1 1133 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 UNC93B1Q9H1C4 597 aa27.83■■■□□ 2.05
LDB1-202ENST00000425280 TRUB2O95900 331 aaKnown RBP27.82■■■□□ 2.04
LDB1-202ENST00000425280 PCK1P35558 622 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 LHX1P48742 406 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 CCNG2Q16589 344 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 C15orf59Q2T9L4 293 aaPredicted RBP27.82■■■□□ 2.04
LDB1-202ENST00000425280 TIGD5Q53EQ6 642 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 TFDP3Q5H9I0 405 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 USP18Q9UMW8 372 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 CEP350Q5VT06 3117 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 C9IYK1 514 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 CLDN5O00501 218 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 DPYSL4O14531 572 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 YY1P25490 414 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 HSPA9P38646 679 aaKnown RBP27.82■■■□□ 2.04
LDB1-202ENST00000425280 RPL21P46778 160 aaKnown RBP27.82■■■□□ 2.04
LDB1-202ENST00000425280 CCDC14Q49A88 953 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 MDH1BQ5I0G3 518 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 PAQR9Q6ZVX9 377 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 CLEC4CQ8WTT0 213 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 LINC01599Q8WXQ3 324 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 HSFY1Q96LI6 401 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 FAM118BQ9BPY3 351 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 DUSP16Q9BY84 665 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 CRTAC1Q9NQ79 661 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 ZDHHC18Q9NUE0 388 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 GRHL1Q9NZI5 618 aa27.82■■■□□ 2.04
LDB1-202ENST00000425280 AGPSO00116 658 aa27.81■■■□□ 2.04
LDB1-202ENST00000425280 XPO1O14980 1071 aaKnown RBP27.81■■■□□ 2.04
LDB1-202ENST00000425280 TJP3O95049 919 aa27.81■■■□□ 2.04
LDB1-202ENST00000425280 TUSC3Q13454 348 aa27.81■■■□□ 2.04
LDB1-202ENST00000425280 RAB6CQ53S08 254 aa27.81■■■□□ 2.04
LDB1-202ENST00000425280 CFAP57Q96MR6 1250 aa27.81■■■□□ 2.04
LDB1-202ENST00000425280 RAB6CQ9H0N0 254 aa27.81■■■□□ 2.04
LDB1-202ENST00000425280 GOLGA6BA6NDN3 693 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 INPPL1O15357 1258 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 LCP1P13796 627 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 ACADSBP45954 432 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 CDK7P50613 346 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 CD300LGQ6UXG3 332 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 PEBP4Q96S96 227 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 CAPN15O75808 1086 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 KDELR1P24390 212 aa27.8■■■□□ 2.04
LDB1-202ENST00000425280 GGCXP38435 758 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms