RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LEFTY2O00292 366 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 GABRDO14764 452 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 HUS1O60921 280 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 ACAT1P24752 427 aaKnown RBP17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 MAGEA11P43364 429 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 KIR2DL1P43626 348 aaPredicted RBP17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 DUOXA1Q1HG43 343 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 LYSMD4Q5XG99 296 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 FAM171BQ6P995 826 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 TTC30AQ86WT1 665 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 ALLCQ8N6M5 410 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 CEP295NLQ96MC4 621 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 PNKPQ96T60 521 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 BLOC1S4Q9NUP1 217 aa17.95■□□□□ 0.46
CHCHD3-202ENST00000423635 CYP17A1P05093 508 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 ITPKAP23677 461 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 ADSSP30520 456 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 SLC6A11P48066 632 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 LHX1P48742 406 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 HNRNPDQ14103 355 aaKnown RBP17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 POSTNQ15063 836 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 DHCR24Q15392 516 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 EOGTQ5NDL2 527 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 ARMCX6Q7L4S7 300 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 RAB44Q7Z6P3 723 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 HDDC3Q8N4P3 179 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 CHCHD4Q8N4Q1 142 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 LRRC52Q8N7C0 313 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 CXorf38Q8TB03 319 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 SPATA17Q96L03 361 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 AK8Q96MA6 479 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 AGAP1Q9UPQ3 857 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 GPSM3Q9Y4H4 160 aa17.94■□□□□ 0.46
CHCHD3-202ENST00000423635 ITPR1Q14643 2758 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 KAT7O95251 611 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 KLF8O95600 359 aaPredicted RBP17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 SERPINF2P08697 491 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 POLR2BP30876 1174 aaKnown RBP17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 TIE1P35590 1138 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 TNFRSF4P43489 277 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 ATXN3P54252 364 aaPredicted RBP17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 FAM193AP78312 1265 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 SLC7A9P82251 487 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 MESP2Q0VG99 397 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 ZNF423Q2M1K9 1284 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 EMC10Q5UCC4 262 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 FILIP1Q7Z7B0 1213 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 OSTM1Q86WC4 334 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 SFTPA1Q8IWL2 248 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 SCN4BQ8IWT1 228 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 TOP6BLQ8N6T0 577 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 C1orf127Q8N9H9 656 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 CAPN10Q9HC96 672 aa17.93■□□□□ 0.46
CHCHD3-202ENST00000423635 PLXND1Q9Y4D7 1925 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 SLC9A3R1O14745 358 aaPredicted RBP17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 AP5Z1O43299 807 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 OPHN1O60890 802 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 ADAM23O75077 832 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 OLFM2O95897 454 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 APODP05090 189 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 ITGB3P05106 788 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 PCSK1P29120 753 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 GRIA2P42262 883 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 WNT7BP56706 349 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 GFPT1Q06210 699 aaPredicted RBP17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 DHX8Q14562 1220 aaKnown RBP17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 CCDC142Q17RM4 750 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 SCARA3Q6AZY7 606 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 RHBDF2Q6PJF5 856 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 VSTM1Q6UX27 236 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 ZNF720Q7Z2F6 126 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 CACTINQ8WUQ7 758 aaKnown RBP17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 POMGNT1Q8WZA1 660 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 CALML4Q96GE6 196 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 RNF38Q9H0F5 515 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 ZHX3Q9H4I2 956 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 TRPM5Q9NZQ8 1165 aa17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 CIZ1Q9ULV3 898 aaPredicted RBP17.92■□□□□ 0.46
CHCHD3-202ENST00000423635 SMG1Q96Q15 3661 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 ADAMTS20P59510 1910 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 ZNF840PA6NDX5 716 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 CFIP05156 583 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 KRT18P05783 430 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 CD59P13987 128 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 PPP3CCP48454 512 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 TFAMQ00059 246 aaKnown RBP17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 MCM6Q14566 821 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 SOWAHAQ2M3V2 549 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 SOWAHCQ53LP3 525 aaPredicted RBP17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 C4orf50Q6ZRC1 276 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 DPH6Q7L8W6 267 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 LIMS2Q7Z4I7 341 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 RABEPKQ7Z6M1 372 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 KCNV2Q8TDN2 545 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 HMGB4Q8WW32 186 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 RAD54LQ92698 747 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 TTLL2Q9BWV7 592 aa17.91■□□□□ 0.46
CHCHD3-202ENST00000423635 STRA6Q9BX79 667 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms