RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 BDNFP23560 247 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 GRIK1P39086 918 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 STAT6P42226 847 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 PSMC1P62191 440 aaKnown RBP18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 ZXDBP98169 803 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 SURF1Q15526 300 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 DUOXA2Q1HG44 320 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 C2orf27AQ580R0 203 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 DAB2IPQ5VWQ8 1189 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 LMBRD2Q68DH5 695 aaPredicted RBP18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 PSAPL1Q6NUJ1 521 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 DENND5BQ6ZUT9 1274 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 RASSF3Q86WH2 238 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 OR5B17Q8NGF7 314 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 MYLPFQ96A32 169 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 EHD2Q9NZN4 543 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 USP24Q9UPU5 2620 aa18.02■□□□□ 0.48
UPF3AP3-201ENST00000420996 PTPRJQ12913 1337 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 LNP1A1A4G5 178 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 LEFTY2O00292 366 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 TRIM66O15016 1216 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 KHNYNO15037 678 aaKnown RBP18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 PDGFRBP09619 1106 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 ANXA13P27216 316 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 PPP3CCP48454 512 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 USP46P62068 366 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 SLC7A9P82251 487 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 CYP27A1Q02318 531 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 GAB4Q2WGN9 574 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 ADGRG2Q8IZP9 1017 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 MYCBPAPQ8TBZ2 947 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 CNOT6LQ96LI5 555 aaKnown RBP18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 TTLL2Q9BWV7 592 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 TPSD1Q9BZJ3 242 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 MMP17Q9ULZ9 603 aa18.01■□□□□ 0.47
UPF3AP3-201ENST00000420996 A0A087X0B3 334 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 ZNF840PA6NDX5 716 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 NOVA1P51513 510 aaKnown RBP18■□□□□ 0.47
UPF3AP3-201ENST00000420996 SEC13P55735 322 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 NOP14P78316 857 aaKnown RBP18■□□□□ 0.47
UPF3AP3-201ENST00000420996 MRPS21P82921 87 aaKnown RBP18■□□□□ 0.47
UPF3AP3-201ENST00000420996 CUL4AQ13619 759 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 CRY1Q16526 586 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 ANO7Q6IWH7 933 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 STXBP4Q6ZWJ1 553 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 CCDC65Q8IXS2 484 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 CCDC33Q8N5R6 958 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 PCED1BQ96HM7 432 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 C8orf48Q96LL4 319 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 MMS19Q96T76 1030 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 KIAA1586Q9HCI6 787 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 MORC2Q9Y6X9 1032 aaPredicted RBP18■□□□□ 0.47
UPF3AP3-201ENST00000420996 LAMA1P25391 3075 aa18■□□□□ 0.47
UPF3AP3-201ENST00000420996 SLC9A3R1O14745 358 aaPredicted RBP17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 CYP17A1P05093 508 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 FAM163BP0C2L3 166 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 CEBPZQ03701 1054 aaKnown RBP17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 RESTQ13127 1097 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 FAM173BQ6P4H8 233 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 CYP2U1Q7Z449 544 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 FILIP1Q7Z7B0 1213 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 CBWD2Q8IUF1 395 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 WDR49Q8IV35 697 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 RNF38Q9H0F5 515 aa17.99■□□□□ 0.47
UPF3AP3-201ENST00000420996 ANTXRLA6NF34 631 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 F8VP50 259 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 GIPC1O14908 333 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 ALDH1A2O94788 518 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 OLFM2O95897 454 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 PROS1P07225 676 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 BCKDHBP21953 392 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 SLC39A14Q15043 492 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 DHCR24Q15392 516 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 HSF5Q4G112 596 aaPredicted RBP17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 TMEM92Q6UXU6 159 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 TRAPPC11Q7Z392 1133 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 MDGA1Q8NFP4 955 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 OLIG1Q8TAK6 271 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 PNKPQ96T60 521 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 SNX25Q9H3E2 840 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 TMEM9BQ9NQ34 198 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 HSPBP1Q9NZL4 362 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 CPQQ9Y646 472 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 MYOFQ9NZM1 2061 aa17.98■□□□□ 0.47
UPF3AP3-201ENST00000420996 A0A0A0MRY4 1105 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 CDX4O14627 284 aaPredicted RBP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 TACC1O75410 805 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 OAS1P00973 400 aaKnown RBP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 EIF2DP41214 584 aaKnown RBP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 SLC6A11P48066 632 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 DHPSP49366 369 aaPredicted RBP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 MDH1BQ5I0G3 518 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 SH3PXD2AQ5TCZ1 1133 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 TDRD10Q5VZ19 366 aaKnown RBP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 HS2ST1Q7LGA3 356 aa17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 DDX42Q86XP3 938 aaKnown RBP eCLIP17.97■□□□□ 0.47
UPF3AP3-201ENST00000420996 IL17RCQ8NAC3 791 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms