RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 HDAC1Q13547 482 aaPredicted RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 TTF1Q15361 905 aaPredicted RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 ANKS6Q68DC2 871 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 CCSAPQ6IQ19 270 aaPredicted RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 G2E3Q7L622 706 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 C7orf25Q9BPX7 421 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 PDCD2LQ9BRP1 358 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 SENP6Q9GZR1 1112 aaPredicted RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 AS3MTQ9HBK9 375 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 TMOD4Q9NZQ9 345 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 LUC7L2Q9Y383 392 aaKnown RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 COL6A3P12111 3177 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 AK9Q5TCS8 1911 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 CAND2O75155 1236 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 ZRANB2O95218 330 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS45-203ENST00000419023 PDE8BO95263 885 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 RGS2P41220 211 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 SCNN1GP51170 649 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 RABGGTBP53611 331 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 LRRC26Q2I0M4 334 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 UAP1L1Q3KQV9 507 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 USP39Q53GS9 565 aaKnown RBP6.41□□□□□ -1.38
VPS45-203ENST00000419023 FAM47AQ5JRC9 791 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 MFSD14CQ5VZR4 134 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 CDC42EP5Q6NZY7 148 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 SLC4A10Q6U841 1118 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 RHOT1Q8IXI2 618 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 ZGPATQ8N5A5 531 aaKnown RBP6.41□□□□□ -1.38
VPS45-203ENST00000419023 CCHCR1Q8TD31 782 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 SH3RF3Q8TEJ3 882 aaPredicted RBP6.41□□□□□ -1.38
VPS45-203ENST00000419023 EXTL1Q92935 676 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 TSR2Q969E8 191 aaKnown RBP6.41□□□□□ -1.38
VPS45-203ENST00000419023 GPR87Q9BY21 358 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 CPEB1Q9BZB8 566 aaKnown RBP6.41□□□□□ -1.38
VPS45-203ENST00000419023 LANCL2Q9NS86 450 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 SERPINB13Q9UIV8 391 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
VPS45-203ENST00000419023 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 ARAP2Q8WZ64 1704 aa6.41□□□□□ -1.38
VPS45-203ENST00000419023 CCDC154A6NI56 674 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PRR5-ARHGAP8B1AHC4 643 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 HTRA2O43464 458 aaPredicted RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 EDNRBP24530 442 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 ACRV1P26436 265 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 MAPK4P31152 587 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PLA2G5P39877 138 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 WASP42768 502 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 SPP2Q13103 211 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PICALMQ13492 652 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 RRP1BQ14684 758 aaKnown RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 BRD3Q15059 726 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PUM3Q15397 648 aaKnown RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 BEND3Q5T5X7 828 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 C1QL3Q5VWW1 255 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 DOK3Q7L591 496 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 ZNF572Q7Z3I7 529 aaPredicted RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 DZIP1Q86YF9 867 aaKnown RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 CPA6Q8N4T0 437 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 GPRC5AQ8NFJ5 357 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 SLC35B2Q8TB61 432 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 TRIB2Q92519 343 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PMM1Q92871 262 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 RAB24Q969Q5 203 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 HDAC10Q969S8 669 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 MNTQ99583 582 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PUS3Q9BZE2 481 aaKnown RBP6.4□□□□□ -1.38
VPS45-203ENST00000419023 KCNH6Q9H252 994 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 IP6K2Q9UHH9 426 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 GJD2Q9UKL4 321 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 IPPQ9Y573 584 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 PCDHA13Q9Y5I0 950 aa6.4□□□□□ -1.38
VPS45-203ENST00000419023 B5MCH6 92 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 KBTBD13C9JR72 458 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 RAP2AP10114 183 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 ALOX15P16050 662 aaPredicted RBP6.39□□□□□ -1.39
VPS45-203ENST00000419023 FPR1P21462 350 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 GUCY1A2P33402 732 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 MAN2A2P49641 1150 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 HMGCS2P54868 508 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 ADKP55263 362 aaKnown RBP6.39□□□□□ -1.39
VPS45-203ENST00000419023 CCNA1P78396 465 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 MCL1Q07820 350 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 SP140Q13342 867 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 IL10RAQ13651 578 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 C3orf36Q3SXR2 165 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 NRN1LQ496H8 165 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 EPHA10Q5JZY3 1008 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 TREML2Q5T2D2 321 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 WDR78Q5VTH9 848 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 SPRED1Q7Z699 444 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 SMC5Q8IY18 1101 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 MIER2Q8N344 545 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 OR52N2Q8NGI0 321 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 LPIN2Q92539 896 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 IDI2Q9BXS1 227 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 OSBPL5Q9H0X9 879 aaPredicted RBP6.39□□□□□ -1.39
VPS45-203ENST00000419023 MANSC1Q9H8J5 431 aa6.39□□□□□ -1.39
VPS45-203ENST00000419023 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms