RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 PIGZQ86VD9 579 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 NIPA2Q8N8Q9 360 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 MS4A14Q96JA4 679 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 RPGRIP1Q96KN7 1286 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 GPR62Q9BZJ7 368 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 CWH43Q9H720 699 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 VWA8A3KMH1 1905 aa21.88■■□□□ 1.09
CASC3-203ENST00000418132 SF3B1O75533 1304 aaKnown RBP eCLIP21.87■■□□□ 1.095e-6■■■■□ 20.1
CASC3-203ENST00000418132 BEST1O76090 585 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 ACRP10323 421 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 H2AFXP16104 143 aaPredicted RBP21.87■■□□□ 1.09
CASC3-203ENST00000418132 PAFAH1B1P43034 410 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 MARCKSL1P49006 195 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 BCAR1P56945 870 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 TSPY1Q01534 308 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 DCAF12L1Q5VU92 463 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 LRRTM3Q86VH5 581 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 KCTD13Q8WZ19 329 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 MYLPFQ96A32 169 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 TMEM209Q96SK2 561 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 RC3H2Q9HBD1 1191 aaKnown RBP21.87■■□□□ 1.09
CASC3-203ENST00000418132 KRT82Q9NSB4 513 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 TMEM59LQ9UK28 342 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 SCNN1AP37088 669 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 SLC6A3Q01959 620 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 ITIH3Q06033 890 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 ELAVL2Q12926 359 aaKnown RBP21.87■■□□□ 1.09
CASC3-203ENST00000418132 MRPL58Q14197 206 aaKnown RBP21.87■■□□□ 1.09
CASC3-203ENST00000418132 FUT10Q6P4F1 479 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 SCUBE3Q8IX30 993 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 RASGEF1CQ8N431 466 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 ACTRT1Q8TDG2 376 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 SMARCD1Q96GM5 515 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 PIWIL1Q96J94 861 aaKnown RBP21.87■■□□□ 1.09
CASC3-203ENST00000418132 TMLHEQ9NVH6 421 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 EHD2Q9NZN4 543 aa21.87■■□□□ 1.09
CASC3-203ENST00000418132 CEP104O60308 925 aa21.86■■□□□ 1.09
CASC3-203ENST00000418132 AP1G2O75843 785 aa21.86■■□□□ 1.09
CASC3-203ENST00000418132 FGFR3P22607 806 aa21.86■■□□□ 1.09
CASC3-203ENST00000418132 VARS2Q5ST30 1063 aaKnown RBP21.86■■□□□ 1.09
CASC3-203ENST00000418132 FAM171A1Q5VUB5 890 aa21.86■■□□□ 1.09
CASC3-203ENST00000418132 SMOQ99835 787 aa21.86■■□□□ 1.09
CASC3-203ENST00000418132 CSNK1G1Q9HCP0 422 aa21.86■■□□□ 1.09
CASC3-203ENST00000418132 NLRC5Q86WI3 1866 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 NT5C1B-RDH14C9J2C7 533 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 PBX3P40426 434 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 TEX35Q5T0J7 233 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 C16orf59Q7L2K0 433 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 TMEM173Q86WV6 379 aaPredicted RBP21.85■■□□□ 1.09
CASC3-203ENST00000418132 EMC1Q8N766 993 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 ZMIZ2Q8NF64 920 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 KHSRPQ92945 711 aaKnown RBP eCLIP21.85■■□□□ 1.091e-8■□□□□ 8.7
CASC3-203ENST00000418132 UBXN6Q9BZV1 441 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 EPC1Q9H2F5 836 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 TMEM30AQ9NV96 361 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 SMARCAL1Q9NZC9 954 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 PCDH10Q9P2E7 1040 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 PRKAG2Q9UGJ0 569 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 TTC7AQ9ULT0 858 aaPredicted RBP21.85■■□□□ 1.09
CASC3-203ENST00000418132 F8VP50 259 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 ALDH7A1P49419 539 aaKnown RBP21.85■■□□□ 1.09
CASC3-203ENST00000418132 MAP3K7CLP57077 242 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 DAB2IPQ5VWQ8 1189 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 BCL7CQ8WUZ0 217 aaPredicted RBP21.85■■□□□ 1.09
CASC3-203ENST00000418132 GOLGA1Q92805 767 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 ZCWPW1Q9H0M4 648 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 PTPRDP23468 1912 aa21.85■■□□□ 1.09
CASC3-203ENST00000418132 EFEMP2O95967 443 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 LCP1P13796 627 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 CDR1P51861 262 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 CACNA2D1P54289 1103 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 RWDD2BP57060 319 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 TUBB4BP68371 445 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 PPIGQ13427 754 aaKnown RBP eCLIP21.84■■□□□ 1.093e-7■□□□□ 11.1
CASC3-203ENST00000418132 SLC26A9Q7LBE3 791 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 TMCO2Q7Z6W1 182 aaPredicted RBP21.84■■□□□ 1.09
CASC3-203ENST00000418132 RHOT1Q8IXI2 618 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 USTQ9Y2C2 406 aa21.84■■□□□ 1.09
CASC3-203ENST00000418132 C2CD4BA6NLJ0 364 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 PSTPIP1O43586 416 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 PSMA2P25787 234 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 TAS2R40P59535 323 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 ACAP1Q15027 740 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 TRNP1Q6NT89 227 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 CC2D1AQ6P1N0 951 aaPredicted RBP21.83■■□□□ 1.09
CASC3-203ENST00000418132 ARCQ7LC44 396 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 OTOP2Q7RTS6 562 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 GPR161Q8N6U8 529 aaKnown RBP21.83■■□□□ 1.09
CASC3-203ENST00000418132 SPATA4Q8NEY3 305 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 RNPC3Q96LT9 517 aaKnown RBP21.83■■□□□ 1.09
CASC3-203ENST00000418132 KCNK16Q96T55 309 aa21.83■■□□□ 1.09
CASC3-203ENST00000418132 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.83■■□□□ 1.097e-8■■□□□ 12.1
CASC3-203ENST00000418132 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.83■■□□□ 1.09
CASC3-203ENST00000418132 PGRMC1O00264 195 aaKnown RBP21.83■■□□□ 1.08
CASC3-203ENST00000418132 FLT3P36888 993 aa21.83■■□□□ 1.08
CASC3-203ENST00000418132 ZNF143P52747 638 aaPredicted RBP21.83■■□□□ 1.08
CASC3-203ENST00000418132 TAF5Q15542 800 aa21.83■■□□□ 1.08
CASC3-203ENST00000418132 C4orf50Q6ZRC1 276 aa21.83■■□□□ 1.08
CASC3-203ENST00000418132 CEP57Q86XR8 500 aa21.83■■□□□ 1.08
CASC3-203ENST00000418132 CMTR2Q8IYT2 770 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms