RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.64■□□□□ 0.418e-9■■■■□ 19.6
SSBP3-205ENST00000417664 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 GOLGA6BA6NDN3 693 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 HSF2BPO75031 334 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 CCDC130P13994 396 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 TCF4P15884 667 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 CDKN2BP42772 138 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 RGS7P49802 495 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 PLCB3Q01970 1234 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 TUSC3Q13454 348 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 MTMR3Q13615 1198 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 TRADDQ15628 312 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 ATP13A4Q4VNC1 1196 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 SPDYCQ5MJ68 293 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 MFSD7Q6UXD7 560 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 DSTYKQ6XUX3 929 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 SLC24A5Q71RS6 500 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 CMASQ8NFW8 434 aaPredicted RBP17.63■□□□□ 0.41
SSBP3-205ENST00000417664 FAM71BQ8TC56 605 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 SLC2A14Q8TDB8 520 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 C1orf54Q8WWF1 131 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 RXFP2Q8WXD0 754 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 DSEQ9UL01 958 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 USP18Q9UMW8 372 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 PTCH2Q9Y6C5 1203 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
SSBP3-205ENST00000417664 hCG_1818297A0A087WSY0 165 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 LRRD1A4D1F6 860 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 TULP2O00295 520 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 DNM1LO00429 736 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 PAPSS1O43252 624 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-205ENST00000417664 FAM153BP0C7A2 387 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 ODC1P11926 461 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 COL6A1P12109 1028 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 PCSK1P29120 753 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 ADORA2BP29275 332 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 MIPP30301 263 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 TAZQ16635 292 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 FAM153CQ494X1 144 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 DDX42Q86XP3 938 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSBP3-205ENST00000417664 TTC13Q8NBP0 860 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 FMO2Q99518 471 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 HEMGNQ9BXL5 484 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 DPH5Q9H2P9 285 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 DDX43Q9NXZ2 648 aaKnown RBP17.62■□□□□ 0.41
SSBP3-205ENST00000417664 FAM153AQ9UHL3 310 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 CDH9Q9ULB4 789 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 TRIM17Q9Y577 477 aa17.62■□□□□ 0.41
SSBP3-205ENST00000417664 C9IYK1 514 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 TRUB2O95900 331 aaKnown RBP17.61■□□□□ 0.41
SSBP3-205ENST00000417664 CYP11A1P05108 521 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 NPR3P17342 541 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 OAS2P29728 719 aaKnown RBP17.61■□□□□ 0.41
SSBP3-205ENST00000417664 SDC4P31431 198 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 PTPN9P43378 593 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 CDK7P50613 346 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 AFF1P51825 1210 aaKnown RBP17.61■□□□□ 0.41
SSBP3-205ENST00000417664 FAM189BP81408 668 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 BFSP2Q13515 415 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 PPP1R7Q15435 360 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 BOLA3Q53S33 107 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 EFHC1Q5JVL4 640 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 FUKQ8N0W3 1084 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 RNF169Q8NCN4 708 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 CCHCR1Q8TD31 782 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 KCTD13Q8WZ19 329 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 RAPGEF5Q92565 580 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 TBCBQ99426 244 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 HERPUD2Q9BSE4 406 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 CHST7Q9NS84 486 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 C3orf70A6NLC5 250 aaPredicted RBP17.61■□□□□ 0.41
SSBP3-205ENST00000417664 HCRTO43612 131 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 OPA1O60313 960 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 SELPP16109 830 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 KDELR1P24390 212 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 IL1R2P27930 398 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 FLT3P36888 993 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 PTK6Q13882 451 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 TXNRD3NBQ6F5E7 133 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 GLB1LQ6UWU2 654 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 METTL23Q86XA0 190 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 SCUBE3Q8IX30 993 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 GOLGA6L1Q8N7Z2 621 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 TEKT4Q8WW24 435 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 KHSRPQ92945 711 aaKnown RBP eCLIP17.61■□□□□ 0.416e-7■■■□□ 16.7
SSBP3-205ENST00000417664 RUFY1Q96T51 708 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 SYT15Q9BQS2 421 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 ZDHHC18Q9NUE0 388 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 WHRNQ9P202 907 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 KANSL3Q9P2N6 904 aa17.61■□□□□ 0.41
SSBP3-205ENST00000417664 MTRF1LQ9UGC7 380 aaKnown RBP17.61■□□□□ 0.41
SSBP3-205ENST00000417664 DRG1Q9Y295 367 aaKnown RBP17.61■□□□□ 0.41
SSBP3-205ENST00000417664 CASTOR2A6NHX0 329 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 PI4K2BG5E9Z4 385 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 M0QZQ0 153 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 PRPSAP2O60256 369 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 B3GAT3O94766 335 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 KCNJ1P48048 391 aa17.6■□□□□ 0.41
SSBP3-205ENST00000417664 CENPFP49454 3210 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms