RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SYT10Q6XYQ8 523 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 WHAMMQ8TF30 809 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 TWNKQ96RR1 684 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 ZSWIM1Q9BR11 485 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 POMKQ9H5K3 350 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 CD320Q9NPF0 282 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 SEPT11Q9NVA2 429 aaKnown RBP9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 MUTYHQ9UIF7 546 aa9.79□□□□□ -0.84
CHRNA1-206ENST00000416004 TTC28Q96AY4 2481 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 MACROD2A1Z1Q3 448 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 PRR33A8MZF0 331 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 PJA2O43164 708 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 EFEMP2O95967 443 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 HNRNPA1P09651 372 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 SPATA31D3P0C874 917 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 RPL17P18621 184 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 FGFR3P22607 806 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 OR1D2P34982 312 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 GNG11P61952 73 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 MTMR3Q13615 1198 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 SPATA31D4Q6ZUB0 917 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 VPS36Q86VN1 386 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 METTL23Q86XA0 190 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 ELMOD1Q8N336 334 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 LRRC52Q8N7C0 313 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 RHOBTB2Q9BYZ6 727 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 GEMIN8Q9NWZ8 242 aaKnown RBP9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 MTRRQ9UBK8 725 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 NME7Q9Y5B8 376 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 BACE2Q9Y5Z0 518 aa9.78□□□□□ -0.84
CHRNA1-206ENST00000416004 C2orf16Q68DN1 1984 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 PRRG1O14668 218 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 CILPO75339 1184 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 ZMYND10O75800 440 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 LRG1P02750 347 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 ODC1P11926 461 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 BRD2P25440 801 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 TKTP29401 623 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 GNA15P30679 374 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 BRCC3P46736 316 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 KIF5AQ12840 1032 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 CTXN3Q4LDR2 81 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 UBALD2Q8IYN6 164 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 ZDHHC14Q8IZN3 488 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 TFAP2BQ92481 460 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 ZNF592Q92610 1267 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 EDAQ92838 391 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 SUSD3Q96L08 255 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 MMS19Q96T76 1030 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 MRPL45Q9BRJ2 306 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 PRKD2Q9BZL6 878 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 ELOVL4Q9GZR5 314 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 DNAI1Q9UI46 699 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 PCDHB8Q9UN66 801 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 CDY1Q9Y6F8 540 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 VWA8A3KMH1 1905 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 BDP1A6H8Y1 2624 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 DENND4AQ7Z401 1863 aa9.77□□□□□ -0.85
CHRNA1-206ENST00000416004 THAP12O43422 761 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 HCRTO43612 131 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 KIF5CO60282 957 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 C8AP07357 584 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 CPB1P15086 417 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 LRPAP1P30533 357 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 HOXA9P31269 272 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 RAD23BP54727 409 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 GALCP54803 685 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 ARPP19P56211 112 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 TNNC1P63316 161 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 YWHAHQ04917 246 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 RAB33AQ14088 237 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 SOWAHAQ2M3V2 549 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 ZNF569Q5MCW4 686 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 PASD1Q8IV76 773 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 SUGP1Q8IWZ8 645 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 SLC35F6Q8N357 371 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 C3orf58Q8NDZ4 430 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 FAXDC2Q96IV6 333 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 ZNF560Q96MR9 790 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 CLSTN3Q9BQT9 956 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 CYP3A43Q9HB55 503 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 WDR6Q9NNW5 1121 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 FBXW11Q9UKB1 542 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 DSEQ9UL01 958 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 MAFFQ9ULX9 164 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 SORCS3Q9UPU3 1222 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 CAPN6Q9Y6Q1 641 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 ZFP37Q9Y6Q3 630 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 CLUHO75153 1309 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 C2CD4DB7Z1M9 353 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 I3L4J1 428 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 BUB1O43683 1085 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 KRT86O43790 486 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 MOCS3O95396 460 aa9.76□□□□□ -0.85
CHRNA1-206ENST00000416004 FTLP02792 175 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms