RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZACNQ401N2 412 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 TRIM68Q6AZZ1 485 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 TNIP3Q96KP6 325 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 RBM12Q9NTZ6 932 aaKnown RBP26.6■■□□□ 1.85
HLA-C-204ENST00000415537 ATP8B3O60423 1300 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 RIF1Q5UIP0 2472 aaKnown RBP26.59■■□□□ 1.85
HLA-C-204ENST00000415537 C2orf78A6NCI8 922 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 MAPK13O15264 365 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 RAP1GAPP47736 663 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 CXCL12P48061 93 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 PPP3CCP48454 512 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 VAMP7P51809 220 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 NOP14P78316 857 aaKnown RBP26.59■■□□□ 1.85
HLA-C-204ENST00000415537 NUCB2P80303 420 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 MTF1Q14872 753 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 PDGFRLQ15198 375 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 NFIL3Q16649 462 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 SV2AQ7L0J3 742 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 GUF1Q8N442 669 aaKnown RBP26.59■■□□□ 1.85
HLA-C-204ENST00000415537 SPEM1Q8N4L4 309 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 ZBTB44Q8NCP5 570 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 TAF4BQ92750 862 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 SLC22A12Q96S37 553 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 MED10Q9BTT4 135 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 B3GNT5Q9BYG0 378 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 ZNF518BQ9C0D4 1074 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 HPS4Q9NQG7 708 aa26.59■■□□□ 1.85
HLA-C-204ENST00000415537 HELZP42694 1942 aaKnown RBP26.59■■□□□ 1.85
HLA-C-204ENST00000415537 CLDN5O00501 218 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 KRT13P13646 458 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 PIK3CAP42336 1068 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 USP46P62068 366 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 INTS8Q75QN2 995 aaKnown RBP26.58■■□□□ 1.85
HLA-C-204ENST00000415537 ELMO3Q96BJ8 720 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 TTLL2Q9BWV7 592 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 DUS2Q9NX74 493 aaKnown RBP26.58■■□□□ 1.85
HLA-C-204ENST00000415537 GCNT4Q9P109 453 aa26.58■■□□□ 1.85
HLA-C-204ENST00000415537 MYH10P35580 1976 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 ABL1P00519 1130 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 PFKLP17858 780 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 ADAM9Q13443 819 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 ZNF77Q15935 545 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 SYNPOQ8N3V7 929 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 OSCP1Q8WVF1 389 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 NELL1Q92832 810 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 SLITRK1Q96PX8 696 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 IMPG2Q9BZV3 1241 aa26.57■■□□□ 1.84
HLA-C-204ENST00000415537 CFAP54Q96N23 3096 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 ARSAP15289 507 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 PSMC2P35998 433 aaKnown RBP26.56■■□□□ 1.84
HLA-C-204ENST00000415537 IFNAR2P48551 515 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 CACNA2D1P54289 1103 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 GRSF1Q12849 480 aaKnown RBP eCLIP26.56■■□□□ 1.84
HLA-C-204ENST00000415537 IFRD2Q12894 506 aaPredicted RBP26.56■■□□□ 1.84
HLA-C-204ENST00000415537 CCINQ13939 588 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 GAS6Q14393 721 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 FAM186BQ8IYM0 893 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 CPA6Q8N4T0 437 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 RIN3Q8TB24 985 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 SH3RF2Q8TEC5 729 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 RUBCNQ92622 972 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 EXOC4Q96A65 974 aa26.56■■□□□ 1.84
HLA-C-204ENST00000415537 AKAP3O75969 853 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 HLA-DRAP01903 254 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 TRIM21P19474 475 aaKnown RBP26.55■■□□□ 1.84
HLA-C-204ENST00000415537 SATB1Q01826 763 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 USP4Q13107 963 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 Q6ZS52 159 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 NUP93Q8N1F7 819 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 SUMF1Q8NBK3 374 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 ATP2A3Q93084 1043 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 SDCBP2Q9H190 292 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 RMND1Q9NWS8 449 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 ARHGAP26Q9UNA1 814 aa26.55■■□□□ 1.84
HLA-C-204ENST00000415537 ZNF840PA6NDX5 716 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 OTOL1A6NHN0 477 aaPredicted RBP26.54■■□□□ 1.84
HLA-C-204ENST00000415537 LILRB5O75023 590 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 RTN3O95197 1032 aaPredicted RBP26.54■■□□□ 1.84
HLA-C-204ENST00000415537 ASS1P00966 412 aaKnown RBP26.54■■□□□ 1.84
HLA-C-204ENST00000415537 YWHAQP27348 245 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 TAF10Q12962 218 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 PNOCQ13519 176 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 WDR44Q5JSH3 913 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 C1orf220Q5T0J3 134 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 ACOT1Q86TX2 421 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 FAM35AQ86V20 835 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 FMR1NBQ8N0W7 255 aaPredicted RBP26.54■■□□□ 1.84
HLA-C-204ENST00000415537 SMARCD1Q96GM5 515 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 MMRN2Q9H8L6 949 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 ECT2Q9H8V3 914 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 TMEM30AQ9NV96 361 aa26.54■■□□□ 1.84
HLA-C-204ENST00000415537 TRDMT1O14717 391 aaKnown RBP26.53■■□□□ 1.84
HLA-C-204ENST00000415537 TDGF1P13385 188 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 TCF3P15923 654 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 GCLMP48507 274 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 ENPEPQ07075 957 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 NR1H3Q13133 447 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 SPOPLQ6IQ16 392 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 UNC93AQ86WB7 457 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 CCDC150Q8NCX0 1101 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms