RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SLC8A2Q9UPR5 921 aa15.48■□□□□ 0.07
MCF2L-210ENST00000409954 ZNF292O60281 2723 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.47■□□□□ 0.07
MCF2L-210ENST00000409954 PDXKO00764 312 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 KIF20AO95235 890 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 ARSAP15289 507 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 MYL6P60660 151 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 MDH1BQ5I0G3 518 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 FSTL4Q6MZW2 842 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 SH3RF2Q8TEC5 729 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 TNIP3Q96KP6 325 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 SLC22A12Q96S37 553 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 ELOVL4Q9GZR5 314 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 XYLT2Q9H1B5 865 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 EXOC1Q9NV70 894 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 NXF1Q9UBU9 619 aaKnown RBP15.47■□□□□ 0.07
MCF2L-210ENST00000409954 USP18Q9UMW8 372 aa15.47■□□□□ 0.07
MCF2L-210ENST00000409954 C2orf78A6NCI8 922 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 ZNF840PA6NDX5 716 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 F8VP50 259 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 SLC9A3R1O14745 358 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 IKBKBO14920 756 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 KLRC4O43908 158 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 RTN3O95197 1032 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 C4BPAP04003 597 aaKnown RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 RPN1P04843 607 aaKnown RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 P4HA1P13674 534 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 SLC7A9P82251 487 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 DMWDQ09019 674 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 STK4Q13043 487 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 BIRC3Q13489 604 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 CCDC142Q17RM4 750 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 EML3Q32P44 896 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 HEATR6Q6AI08 1181 aaKnown RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 CEP68Q76N32 757 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 ADGRG2Q8IZP9 1017 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 NUP93Q8N1F7 819 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 B3GALNT2Q8NCR0 500 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 CD101Q93033 1021 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 CCDC47Q96A33 483 aaKnown RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 LOXL4Q96JB6 756 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 SLITRK1Q96PX8 696 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 GZF1Q9H116 711 aaPredicted RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 LINC00597Q9H2U6 94 aa15.46■□□□□ 0.07
MCF2L-210ENST00000409954 FBRSL1Q9HCM7 1045 aaKnown RBP15.46■□□□□ 0.07
MCF2L-210ENST00000409954 ACTN4O43707 911 aaKnown RBP15.45■□□□□ 0.06
MCF2L-210ENST00000409954 NFATC1O95644 943 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 EGFP01133 1207 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 YWHAQP27348 245 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 USP46P62068 366 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 SPEM2Q0P670 501 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 USP4Q13107 963 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 LPAL2Q16609 132 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 KMT5BQ4FZB7 885 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 ZNF667Q5HYK9 610 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 SPRYD3Q8NCJ5 442 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 RIN3Q8TB24 985 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 TMC2Q8TDI7 906 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 OVCA2Q8WZ82 227 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 TAF4BQ92750 862 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 CHFRQ96EP1 664 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 SPATA32Q96LK8 384 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 RTKNQ9BST9 563 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 COMMD8Q9NX08 183 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 VPS13AQ96RL7 3174 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 TICRRQ7Z2Z1 1910 aa15.45■□□□□ 0.06
MCF2L-210ENST00000409954 ATP8B3O60423 1300 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 COL4A2P08572 1712 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 A0A1B0GVL5 298 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 LEFTY2O00292 366 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 CALUO43852 315 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-210ENST00000409954 RNF40O75150 1001 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 AKAP3O75969 853 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 ABL1P00519 1130 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 ATXN1P54253 815 aaKnown RBP15.44■□□□□ 0.06
MCF2L-210ENST00000409954 KRT85P78386 507 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 TAF10Q12962 218 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 NCOA4Q13772 614 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 PKP1Q13835 747 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 CSRP2Q16527 193 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 SYT13Q7L8C5 426 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.44■□□□□ 0.06
MCF2L-210ENST00000409954 DDX42Q86XP3 938 aaKnown RBP eCLIP15.44■□□□□ 0.06
MCF2L-210ENST00000409954 GRAMD1CQ8IYS0 662 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 TTC16Q8NEE8 873 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 PDZD8Q8NEN9 1154 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 GAB3Q8WWW8 586 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 B3GNT5Q9BYG0 378 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 RNF38Q9H0F5 515 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 KCTD10Q9H3F6 313 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 C2orf42Q9NWW7 574 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 CDV3Q9UKY7 258 aaKnown RBP15.44■□□□□ 0.06
MCF2L-210ENST00000409954 FRMD4BQ9Y2L6 1034 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 NME7Q9Y5B8 376 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
MCF2L-210ENST00000409954 WNT6Q9Y6F9 365 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms