RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CFAP221Q4G0U5 840 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 PKDCCQ504Y2 493 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 PMF1Q6P1K2 205 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 NDRG1Q92597 394 aaKnown RBP14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 PANX2Q96RD6 677 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 DEF6Q9H4E7 631 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 NHEJ1Q9H9Q4 299 aaPredicted RBP14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 CDH22Q9UJ99 828 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 INSL5Q9Y5Q6 135 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 EYSQ5T1H1 3165 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 A0A087X0T9 212 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 GABBR2O75899 941 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 FAM228BP0C875 321 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 GPD2P43304 727 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 BCAT1P54687 386 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 BST2Q10589 180 aaKnown RBP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 LIN9Q5TKA1 542 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 PIGZQ86VD9 579 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 TMEM139Q8IV31 216 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 SCAMP5Q8TAC9 235 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 FUBP3Q96I24 572 aaKnown RBP eCLIP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 DMAP1Q9NPF5 467 aaPredicted RBP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 PCDHGC3Q9UN70 934 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 MAGED2Q9UNF1 606 aaPredicted RBP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 MYO16Q9Y6X6 1858 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 LCP1P13796 627 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 ANXA13P27216 316 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 GSDMDP57764 484 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 USP46P62068 366 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 NOMO3P69849 1222 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 DLX2Q07687 328 aaPredicted RBP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 CYP4A22Q5TCH4 519 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 TCEAL8Q8IYN2 117 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 C2orf15Q8WU43 125 aaKnown RBP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 CPXM1Q96SM3 734 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 BAG1Q99933 345 aaPredicted RBP14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 ABCB6Q9NP58 842 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 GREB1Q4ZG55 1949 aa14.9□□□□□ -0.02
CHRNA1-204ENST00000409323 PATJQ8NI35 1801 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 ZNF638Q14966 1978 aaKnown RBP14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 HHLA1C9JL84 531 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 AKR1B10O60218 316 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 FOSL2P15408 326 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 ALDH1A3P47895 512 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 KIF11P52732 1056 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 SLC5A3P53794 718 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 ADIGQ0VDE8 80 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 STILQ15468 1287 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CLUL1Q15846 466 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CLEC16AQ2KHT3 1053 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 PPM1LQ5SGD2 360 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 VSTM1Q6UX27 236 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 TMC5Q6UXY8 1006 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 RAD9BQ6WBX8 426 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 ZNF677Q86XU0 584 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 LRRC8AQ8IWT6 810 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CLEC4CQ8WTT0 213 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 SLC35F5Q8WV83 523 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 PPP2R3CQ969Q6 453 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 MIS12Q9H081 205 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CSNK1G1Q9HCP0 422 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 HCFC1R1Q9NWW0 138 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 MTMR10Q9NXD2 777 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CHORDC1Q9UHD1 332 aaPredicted RBP14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 CEP83Q9Y592 693 aa14.89□□□□□ -0.03
CHRNA1-204ENST00000409323 E5RJQ4 531 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 XPO1O14980 1071 aaKnown RBP14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 TRIM66O15016 1216 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 LRG1P02750 347 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 ERBB2P04626 1255 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 CYP1A1P04798 512 aaPredicted RBP14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 MAGEA11P43364 429 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 TUFMP49411 452 aaKnown RBP14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 PDCLQ13371 301 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 PLD1Q13393 1074 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 KCNC3Q14003 757 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 PTPN20Q4JDL3 420 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 RARS2Q5T160 578 aaKnown RBP14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 CYP26C1Q6V0L0 522 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 MMS22LQ6ZRQ5 1243 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 FMNL3Q8IVF7 1028 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 HS6ST3Q8IZP7 471 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 TMEM35BQ8NCS4 154 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 CCDC42Q96M95 316 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 C11orf70Q9BRQ4 267 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 TFR2Q9UP52 801 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 BZW2Q9Y6E2 419 aaKnown RBP14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 C2orf16Q68DN1 1984 aa14.88□□□□□ -0.03
CHRNA1-204ENST00000409323 CCDC195A0A1B0GUA6 201 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 SLC38A8A6NNN8 435 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 ZNF263O14978 683 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 TBX10O75333 385 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 ZMYND10O75800 440 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 GJB6O95452 261 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 USP17L7P0C7H9 530 aa14.87□□□□□ -0.03
CHRNA1-204ENST00000409323 SETSIPP0DME0 302 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms