RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 ADGRD2Q7Z7M1 963 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 PASD1Q8IV76 773 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 SLC22A17Q8WUG5 538 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 NOX5Q96PH1 765 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 PLEKHA4Q9H4M7 779 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 PRDM12Q9H4Q4 367 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 NSUN3Q9H649 340 aaKnown RBP21.64■■□□□ 1.05
VSX1-203ENST00000409285 DPP7Q9UHL4 492 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 NAGPAQ9UK23 515 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 SOWAHDA6NJG2 315 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 BEST1O76090 585 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 CSPG5O95196 566 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 CYLC1P35663 651 aaPredicted RBP21.63■■□□□ 1.05
VSX1-203ENST00000409285 RPL10AP62906 217 aaKnown RBP21.63■■□□□ 1.05
VSX1-203ENST00000409285 PDCLQ13371 301 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 KCNC3Q14003 757 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 CCDC149Q6ZUS6 474 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 TTC9BQ8N6N2 239 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 C1orf131Q8NDD1 294 aaKnown RBP21.63■■□□□ 1.05
VSX1-203ENST00000409285 UBA3Q8TBC4 463 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 KCTD13Q8WZ19 329 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 SPATA17Q96L03 361 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 HSFY1Q96LI6 401 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 GUCD1Q96NT3 240 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 TLE6Q9H808 572 aa21.63■■□□□ 1.05
VSX1-203ENST00000409285 EIF3CLB5ME19 914 aaKnown RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 HHLA1C9JL84 531 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 F8VP50 259 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 SEC24AO95486 1093 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 ELF1P32519 619 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 SSTR3P32745 418 aaPredicted RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 MAP3K7CLP57077 242 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 PIGZQ86VD9 579 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 PHF13Q86YI8 300 aaPredicted RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 KCNK16Q96T55 309 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 EIF3CQ99613 913 aaKnown RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 CDX2Q99626 313 aaPredicted RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.62■■□□□ 1.05
VSX1-203ENST00000409285 SLC4A5Q9BY07 1137 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 ISCUQ9H1K1 167 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 CYP4F11Q9HBI6 524 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 SEPT11Q9NVA2 429 aaKnown RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 CYTH4Q9UIA0 394 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 HCFC2Q9Y5Z7 792 aa21.62■■□□□ 1.05
VSX1-203ENST00000409285 EPN1Q9Y6I3 576 aaPredicted RBP21.62■■□□□ 1.05
VSX1-203ENST00000409285 NDUFA10O95299 355 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 PAPLNO95428 1278 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 MMP8P22894 467 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 GRIK1P39086 918 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 NSFP46459 744 aaKnown RBP21.61■■□□□ 1.05
VSX1-203ENST00000409285 GFPT1Q06210 699 aaPredicted RBP21.61■■□□□ 1.05
VSX1-203ENST00000409285 PLD1Q13393 1074 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 MGAT5BQ3V5L5 792 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 RAB41Q5JT25 222 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 NAA35Q5VZE5 725 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 ACAD10Q6JQN1 1059 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 PMF1Q6P1K2 205 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 ELMSAN1Q6PJG2 1045 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 RAD9BQ6WBX8 426 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 KREMEN2Q8NCW0 462 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 MSANTD4Q8NCY6 345 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 SEPT5Q99719 369 aaPredicted RBP21.61■■□□□ 1.05
VSX1-203ENST00000409285 KCNF1Q9H3M0 494 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 SLC27A5Q9Y2P5 690 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 YIPF1Q9Y548 306 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 INSL5Q9Y5Q6 135 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 DOCK6Q96HP0 2047 aa21.61■■□□□ 1.05
VSX1-203ENST00000409285 TULP2O00295 520 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 PRRG1O14668 218 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 TNFRSF10BO14763 440 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 RTN2O75298 545 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 ATF6P18850 670 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 HOXA9P31269 272 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 C10orf76Q5T2E6 689 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 LIN9Q5TKA1 542 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 ALKBH5Q6P6C2 394 aaKnown RBP21.6■■□□□ 1.05
VSX1-203ENST00000409285 TMEM110Q86TL2 294 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 VCPIP1Q96JH7 1222 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 NOTCH4Q99466 2003 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 MTCH2Q9Y6C9 303 aa21.6■■□□□ 1.05
VSX1-203ENST00000409285 NCANO14594 1321 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 POU2F2P09086 479 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 ACADSBP45954 432 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 GABRB2P47870 512 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 NRIP1P48552 1158 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 SNX16P57768 344 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 C1QBPQ07021 282 aaKnown RBP21.59■■□□□ 1.05
VSX1-203ENST00000409285 TMEM184AQ6ZMB5 413 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 MON1BQ7L1V2 547 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 CPA5Q8WXQ8 436 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 PPP1R13BQ96KQ4 1090 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 CPXM1Q96SM3 734 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 GAS2L1Q99501 681 aaPredicted RBP21.59■■□□□ 1.05
VSX1-203ENST00000409285 MIS12Q9H081 205 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 MAN1C1Q9NR34 630 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 SPTLC3Q9NUV7 552 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 TAS2R14Q9NYV8 317 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 XIRP2A4UGR9 3374 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 BRWD1Q9NSI6 2320 aa21.59■■□□□ 1.05
VSX1-203ENST00000409285 ZNF263O14978 683 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms