RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 NSMFQ6X4W1 530 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 NANOGNBQ7Z5D8 188 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 TRIM50Q86XT4 487 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 SLFN12Q8IYM2 578 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 CCDC33Q8N5R6 958 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 IGSF9Q9P2J2 1179 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 CDH22Q9UJ99 828 aa23.3■■□□□ 1.32
CUEDC1-202ENST00000407144 GOLGA8RI6L899 631 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 TSHRP16473 764 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 RPA1P27694 616 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 STT3AP46977 705 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 SLC25A3Q00325 362 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 CETN1Q12798 172 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 SH2D5Q6ZV89 423 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 ARHGEF19Q8IW93 802 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 SHKBP1Q8TBC3 707 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 BORCS5Q969J3 196 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 NEURL2Q9BR09 285 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 SMYD3Q9H7B4 428 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 SCHIP1Q9P0W5 487 aaPredicted RBP23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 APPL1Q9UKG1 709 aa23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 GPC6Q9Y625 555 aaPredicted RBP23.29■■□□□ 1.32
CUEDC1-202ENST00000407144 IQANK1A0A1B0GTG1 560 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 C6orf222P0C671 652 aaPredicted RBP23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 RARS2Q5T160 578 aaKnown RBP23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 DEFB132Q7Z7B7 95 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 TICAM1Q8IUC6 712 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 PPM1KQ8N3J5 372 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 NRDE2Q9H7Z3 1164 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 ANAPC7Q9UJX3 599 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 TRIM17Q9Y577 477 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 SDR42E2A6NKP2 422 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 BAIAP3O94812 1187 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 KLHL2O95198 593 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 ACAT1P24752 427 aaKnown RBP23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 PRDX6P30041 224 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 ALDH18A1P54886 795 aaKnown RBP23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 PSMC6P62333 389 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 TFDP1Q14186 410 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 HP1BP3Q5SSJ5 553 aaPredicted RBP23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 ACAD10Q6JQN1 1059 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 IYDQ6PHW0 289 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 DCDC5Q6ZRR9 648 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 LPCAT2Q7L5N7 544 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 ADCY4Q8NFM4 1077 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 RAB3IL1Q8TBN0 382 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 CNBD2Q96M20 576 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 HEMGNQ9BXL5 484 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 SLC2A11Q9BYW1 496 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 PCDHGB4Q9UN71 923 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 PCDHGB5Q9Y5G0 923 aa23.28■■□□□ 1.32
CUEDC1-202ENST00000407144 ARFGEF1Q9Y6D6 1849 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 PSTPIP1O43586 416 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 FAM155BO75949 473 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 WASHC5Q12768 1159 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 INAQ16352 499 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 DEPDC1Q5TB30 811 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 ARID3BQ8IVW6 561 aaPredicted RBP23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 KLF6Q99612 283 aaPredicted RBP23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 ZNF287Q9HBT7 754 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 AVENQ9NQS1 362 aaPredicted RBP23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 MEI4A8MW99 385 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 GOLGA8TH3BQL2 631 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 LIASO43766 372 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 OCM2P0CE71 109 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 OCMP0CE72 109 aaPredicted RBP23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 ARSEP51690 589 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 AQP5P55064 265 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 EFTUD2Q15029 972 aaKnown RBP eCLIP23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 SLC9A9Q8IVB4 645 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 PPP4R1Q8TF05 950 aa23.27■■□□□ 1.32
CUEDC1-202ENST00000407144 ZNF536O15090 1300 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 ZNF701M0R085 212 aaPredicted RBP23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 GLRA2P23416 452 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 HMOX2P30519 316 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 COPAP53621 1224 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 KCNC4Q03721 635 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 GPS1Q13098 491 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 HIF1AQ16665 826 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 ZNF829Q3KNS6 432 aaPredicted RBP23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 NIPAL1Q6NVV3 410 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 KATNAL2Q8IYT4 538 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 KCTD17Q8N5Z5 321 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 POU5F2Q8N7G0 328 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 MBOAT7Q96N66 472 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 INO80BQ9C086 356 aaPredicted RBP23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 NACA2Q9H009 215 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 TRPC7Q9HCX4 862 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 GPCPD1Q9NPB8 672 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 DRG1Q9Y295 367 aaKnown RBP23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 TSC22D4Q9Y3Q8 395 aa23.26■■□□□ 1.31
CUEDC1-202ENST00000407144 CYP3A7-CYP3A51PA0A087WV96 503 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 LSM1O15116 133 aaKnown RBP23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 FAM189A1O60320 539 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 SPATA31C1P0DKV0 1188 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 CYP3A7P24462 503 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 RXRGP48443 463 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 EPHB1P54762 984 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 MYBPC2Q14324 1141 aa23.25■■□□□ 1.31
CUEDC1-202ENST00000407144 EPC2Q52LR7 807 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms