RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 PDIA2Q13087 525 aaKnown RBP15.98■□□□□ 0.15
LIMK2-204ENST00000406516 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
LIMK2-204ENST00000406516 OASLQ15646 514 aaKnown RBP15.98■□□□□ 0.15
LIMK2-204ENST00000406516 SMTNL2Q2TAL5 461 aa15.98■□□□□ 0.15
LIMK2-204ENST00000406516 RNASEH2BQ5TBB1 312 aaKnown RBP15.98■□□□□ 0.15
LIMK2-204ENST00000406516 TAB3Q8N5C8 712 aaPredicted RBP15.98■□□□□ 0.15
LIMK2-204ENST00000406516 WDTC1Q8N5D0 677 aa15.98■□□□□ 0.15
LIMK2-204ENST00000406516 TFAP2BQ92481 460 aa15.98■□□□□ 0.15
LIMK2-204ENST00000406516 PRCCQ92733 491 aaPredicted RBP15.98■□□□□ 0.15
LIMK2-204ENST00000406516 A8MUI8 341 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 LSM8O95777 96 aaKnown RBP15.97■□□□□ 0.15
LIMK2-204ENST00000406516 GJA9P57773 515 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 ZNF268Q14587 947 aaPredicted RBP15.97■□□□□ 0.15
LIMK2-204ENST00000406516 MORF4L2Q15014 288 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 LRRC38Q5VT99 294 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 ERICH1Q86X53 443 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 WDR49Q8IV35 697 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 ANKLE1Q8NAG6 615 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 PRPF31Q8WWY3 499 aaKnown RBP15.97■□□□□ 0.15
LIMK2-204ENST00000406516 PCYT2Q99447 389 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
LIMK2-204ENST00000406516 NIF3L1Q9GZT8 377 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 AP5M1Q9H0R1 490 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 TMEM134Q9H6X4 195 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 ZWILCHQ9H900 591 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 Q9Y3F1 56 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 L3MBTL1Q9Y468 752 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 MSCO60682 206 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 TFAMQ00059 246 aaKnown RBP15.97■□□□□ 0.15
LIMK2-204ENST00000406516 NR1H3Q13133 447 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 RIPK1Q13546 671 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 CENPUQ71F23 418 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 SMC6Q96SB8 1091 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 GPR20Q99678 358 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 SLCO1B3Q9NPD5 702 aa15.97■□□□□ 0.15
LIMK2-204ENST00000406516 DRG1Q9Y295 367 aaKnown RBP15.97■□□□□ 0.15
LIMK2-204ENST00000406516 SIP14410 1827 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 PIAS1O75925 651 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 GJB1P08034 283 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 SRGAP2CP0DJJ0 459 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 CA4P22748 312 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 RPA3P35244 121 aaPredicted RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 GAD2Q05329 585 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 MTM1Q13496 603 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 TRPC3Q13507 836 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 PIGHQ14442 188 aaPredicted RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 ACCSLQ4AC99 568 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 KCNT1Q5JUK3 1230 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 GNASQ5JWF2 1037 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 PPP1R15BQ5SWA1 713 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 RNF43Q68DV7 783 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 EMID1Q96A84 441 aaPredicted RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 STAMBPL1Q96FJ0 436 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 TJP2Q9UDY2 1190 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 GRID1Q9ULK0 1009 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 FAM189A1O60320 539 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 RFC5P40937 340 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 SPARCL1Q14515 664 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 FSCN1Q16658 493 aaKnown RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 TDRPQ86YL5 185 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 AGAP11Q8TF27 550 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 KCNN1Q92952 543 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 NKD2Q969F2 451 aaPredicted RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 GRAMD1AQ96CP6 724 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 UPF3AQ9H1J1 476 aaKnown RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 PCDH9Q9HC56 1237 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 DDX56Q9NY93 547 aaKnown RBP15.96■□□□□ 0.15
LIMK2-204ENST00000406516 PHTF1Q9UMS5 762 aa15.96■□□□□ 0.15
LIMK2-204ENST00000406516 A0A1W2PPM1 405 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 A6NJR5 290 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 NOP56O00567 594 aaKnown RBP15.95■□□□□ 0.14
LIMK2-204ENST00000406516 ALOX15BO15296 676 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 TOM1L1O75674 476 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 ITGAVP06756 1048 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 PSMA2P25787 234 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 RFC1P35251 1148 aaPredicted RBP15.95■□□□□ 0.14
LIMK2-204ENST00000406516 OSTNP61366 133 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 TARBP2Q15633 366 aaKnown RBP15.95■□□□□ 0.14
LIMK2-204ENST00000406516 DENND1BQ6P3S1 775 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 KLHDC9Q8NEP7 349 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 PPTC7Q8NI37 304 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 DENND1AQ8TEH3 1009 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 ZNF668Q96K58 619 aaPredicted RBP15.95■□□□□ 0.14
LIMK2-204ENST00000406516 MRPL4Q9BYD3 311 aaKnown RBP15.95■□□□□ 0.14
LIMK2-204ENST00000406516 UBN1Q9NPG3 1134 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 ARHGEF3Q9NR81 526 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 NRBP2Q9NSY0 501 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 GEMIN8Q9NWZ8 242 aaKnown RBP15.95■□□□□ 0.14
LIMK2-204ENST00000406516 SHOC2Q9UQ13 582 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 CEP83Q9Y592 693 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 PRPF4O43172 522 aaKnown RBP eCLIP15.95■□□□□ 0.141e-6■□□□□ 8.8
LIMK2-204ENST00000406516 MMP3P08254 477 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 CD19P15391 556 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 MARK3P27448 753 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 STAT5BP51692 787 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 GDF10P55107 478 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 EFTUD2Q15029 972 aaKnown RBP eCLIP15.95■□□□□ 0.142e-6■■■■■ 27.4
LIMK2-204ENST00000406516 HIF1AQ16665 826 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 DUOXA2Q1HG44 320 aa15.95■□□□□ 0.14
LIMK2-204ENST00000406516 ZNF699Q32M78 642 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms