RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ANHXE9PGG2 379 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 PRRG1O14668 218 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 TGM5O43548 720 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 LAMP2P13473 410 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 NDST1P52848 882 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 DMWDQ09019 674 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 INCA1Q0VD86 236 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 SLC39A12Q504Y0 691 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 INTS6LQ5JSJ4 861 aaKnown RBP11.21□□□□□ -0.61
RPAIN-204ENST00000405578 TSSK4Q6SA08 328 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 APTXQ7Z2E3 356 aaKnown RBP11.21□□□□□ -0.61
RPAIN-204ENST00000405578 SPATA2LQ8IUW3 424 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-204ENST00000405578 FMNL3Q8IVF7 1028 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 OR10T2Q8NGX3 314 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 ELMO3Q96BJ8 720 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 SHDQ96IW2 340 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 ERGIC2Q96RQ1 377 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 FAM207AQ9NSI2 230 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-204ENST00000405578 KIAA1257Q9ULG3 409 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 PCDHB4Q9Y5E5 795 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 FASNP49327 2511 aaKnown RBP11.21□□□□□ -0.61
RPAIN-204ENST00000405578 PKD1L2Q7Z442 2459 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 SLC30A4O14863 429 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 LILRB5O75023 590 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 CILPO75339 1184 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 KRT5P13647 590 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ATF2P15336 505 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 PTPN1P18031 435 aaKnown RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 LMO2P25791 158 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 TUFMP49411 452 aaKnown RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 GPC5P78333 572 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 PLD1Q13393 1074 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 NR1I3Q14994 352 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 MLF2Q15773 248 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ARHGAP44Q17R89 818 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 UVSSAQ2YD98 709 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 KLHDC7AQ5VTJ3 777 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 TMEM270Q6UE05 265 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 CYP26C1Q6V0L0 522 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 OSTM1Q86WC4 334 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ARHGEF19Q8IW93 802 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 CRYBG2Q8N1P7 616 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 B3GALNT2Q8NCR0 500 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 MYCBPAPQ8TBZ2 947 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 SPPL2BQ8TCT7 592 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 NETO1Q8TDF5 533 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ZNF707Q96C28 371 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 IQCDQ96DY2 449 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 TMEM176AQ96HP8 235 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 FUBP3Q96I24 572 aaKnown RBP eCLIP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 HEXIM2Q96MH2 286 aaKnown RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 RPP25Q9BUL9 199 aaKnown RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 RHOBTB2Q9BYZ6 727 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 PIDD1Q9HB75 910 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 CYP4F11Q9HBI6 524 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ABCB6Q9NP58 842 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 IFNKQ9P0W0 207 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 HSFX1Q9UBD0 423 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 DNAJC12Q9UKB3 198 aa11.2□□□□□ -0.62
RPAIN-204ENST00000405578 MTF2Q9Y483 593 aaPredicted RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.2□□□□□ -0.62
RPAIN-204ENST00000405578 ZFYVE26Q68DK2 2539 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 GREB1Q4ZG55 1949 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ADAM12O43184 909 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ABLIM3O94929 683 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 PAEPP09466 180 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 OR4Q2P0C623 313 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 CCDC172P0C7W6 258 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 UCHL3P15374 230 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 USP8P40818 1118 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 SLC8A3P57103 927 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 BPIFB4P59827 614 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 PSMC1P62191 440 aaKnown RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 CYP27A1Q02318 531 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ADCY1Q08828 1119 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 RAPGEF1Q13905 1077 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ACAP1Q15027 740 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 LPAL2Q16609 132 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ZNF394Q53GI3 561 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 MDH1BQ5I0G3 518 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 LILRA6Q6PI73 481 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 RSPO2Q6UXX9 243 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ACOT1Q86TX2 421 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 TCEAL8Q8IYN2 117 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ELMOD1Q8N336 334 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 NELL1Q92832 810 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 PGLYRP2Q96PD5 576 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms