RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 PLA2G4AP47712 749 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 ALDH1A3P47895 512 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 NRIP1P48552 1158 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 CDR1P51861 262 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 CACNA2D1P54289 1103 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SNX16P57768 344 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 NOMO3P69849 1222 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 PLD1Q13393 1074 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SLC18A3Q16572 532 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 ACAD10Q6JQN1 1059 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 ELMSAN1Q6PJG2 1045 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 TMEM184AQ6ZMB5 413 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SPATA31D4Q6ZUB0 917 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 PIGZQ86VD9 579 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SCN4BQ8IWT1 228 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 NOX5Q96PH1 765 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SEPT5Q99719 369 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 RHOBTB2Q9BYZ6 727 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 TMEM30AQ9NV96 361 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
LINC00339-201ENST00000404210 COMMD8Q9NX08 183 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 HCFC2Q9Y5Z7 792 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 EPN1Q9Y6I3 576 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-201ENST00000404210 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
LINC00339-201ENST00000404210 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 A0A087X0T9 212 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 HHLA1C9JL84 531 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 F8VP50 259 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 PRRG1O14668 218 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 NCK2O43639 380 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ZMYND10O75800 440 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 LCA5LO95447 670 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 FAM228BP0C875 321 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 EPCAMP16422 314 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 KIF11P52732 1056 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 CENPCQ03188 943 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 HYAL1Q12794 435 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ADAM15Q13444 863 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ADGRE1Q14246 886 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 DDR2Q16832 855 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 RAB41Q5JT25 222 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 C10orf76Q5T2E6 689 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ALKBH5Q6P6C2 394 aaKnown RBP13□□□□□ -0.33
LINC00339-201ENST00000404210 TMEM110Q86TL2 294 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ERICH1Q86X53 443 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
LINC00339-201ENST00000404210 PASD1Q8IV76 773 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 NUP93Q8N1F7 819 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 TTC9BQ8N6N2 239 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 C1orf131Q8NDD1 294 aaKnown RBP13□□□□□ -0.33
LINC00339-201ENST00000404210 CPA5Q8WXQ8 436 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 VCPIP1Q96JH7 1222 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 PPP1R13BQ96KQ4 1090 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 MIS12Q9H081 205 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ISCUQ9H1K1 167 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 NAGPAQ9UK23 515 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 ASB3Q9Y575 518 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 INSL5Q9Y5Q6 135 aa13□□□□□ -0.33
LINC00339-201ENST00000404210 SOWAHDA6NJG2 315 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
LINC00339-201ENST00000404210 TULP2O00295 520 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-201ENST00000404210 PAPLNO95428 1278 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-201ENST00000404210 C8AP07357 584 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 CSH1P0DML2 217 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 CSH2P0DML3 217 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 IGFBP4P22692 258 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 HOXA9P31269 272 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 NSFP46459 744 aaKnown RBP12.99□□□□□ -0.33
LINC00339-201ENST00000404210 GABRB2P47870 512 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 EPHB3P54753 998 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 GFPT1Q06210 699 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-201ENST00000404210 PPM1LQ5SGD2 360 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 NAA35Q5VZE5 725 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 RAD9BQ6WBX8 426 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 DENND5BQ6ZUT9 1274 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 SCML4Q8N228 414 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 MSANTD4Q8NCY6 345 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 CASP10Q92851 521 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 C18orf8Q96DM3 657 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
LINC00339-201ENST00000404210 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 LRRC4Q9HBW1 653 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 IL37Q9NZH6 218 aa12.99□□□□□ -0.33
LINC00339-201ENST00000404210 EHD2Q9NZN4 543 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms