RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 TUFMP49411 452 aaKnown RBP28.39■■■□□ 2.14
CGREF1-204ENST00000402550 BCAT1P54687 386 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 FMO1Q01740 532 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 PAQR9Q6ZVX9 377 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 FAM35AQ86V20 835 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 MSLNLQ96KJ4 702 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 RHOBTB2Q9BYZ6 727 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 UBE2ZQ9H832 354 aaPredicted RBP28.39■■■□□ 2.14
CGREF1-204ENST00000402550 INSL5Q9Y5Q6 135 aa28.39■■■□□ 2.14
CGREF1-204ENST00000402550 CLDN5O00501 218 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 HAPLN1P10915 354 aaPredicted RBP28.38■■■□□ 2.13
CGREF1-204ENST00000402550 BDNFP23560 247 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 SSTR3P32745 418 aaPredicted RBP28.38■■■□□ 2.13
CGREF1-204ENST00000402550 PPM1LQ5SGD2 360 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 CCDC170Q8IYT3 715 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 ZNF518BQ9C0D4 1074 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 KRT82Q9NSB4 513 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 ZDHHC7Q9NXF8 308 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 ADAMTS1Q9UHI8 967 aa28.38■■■□□ 2.13
CGREF1-204ENST00000402550 CCDC195A0A1B0GUA6 201 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 SPDYE4A6NLX3 237 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 LSM8O95777 96 aaKnown RBP28.37■■■□□ 2.13
CGREF1-204ENST00000402550 CHRNB2P17787 502 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 MGAT5BQ3V5L5 792 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 PASD1Q8IV76 773 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 TMEM35BQ8NCS4 154 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 SYT11Q9BT88 431 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 DUSP16Q9BY84 665 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 LHX5Q9H2C1 402 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 SFXN1Q9H9B4 322 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 AP1G2O75843 785 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 SOAT2O75908 522 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 NPR3P17342 541 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 HOXA9P31269 272 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 CYLC1P35663 651 aaPredicted RBP28.37■■■□□ 2.13
CGREF1-204ENST00000402550 BST2Q10589 180 aaKnown RBP28.37■■■□□ 2.13
CGREF1-204ENST00000402550 VSTM1Q6UX27 236 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 SEPT5Q99719 369 aaPredicted RBP28.37■■■□□ 2.13
CGREF1-204ENST00000402550 COG5Q9UP83 839 aa28.37■■■□□ 2.13
CGREF1-204ENST00000402550 PAPLNO95428 1278 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 HNRNPA1P09651 372 aaKnown RBP eCLIP28.36■■■□□ 2.13
CGREF1-204ENST00000402550 SETSIPP0DME0 302 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 KCNA5P22460 613 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 MAGEA11P43364 429 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 TMC5Q6UXY8 1006 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 UBA3Q8TBC4 463 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 FEZF2Q8TBJ5 459 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 NOX5Q96PH1 765 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 PRKD2Q9BZL6 878 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 S1PR5Q9H228 398 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 YIPF1Q9Y548 306 aa28.36■■■□□ 2.13
CGREF1-204ENST00000402550 SOWAHDA6NJG2 315 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 H3BQ06 376 aaPredicted RBP28.35■■■□□ 2.13
CGREF1-204ENST00000402550 IPO7O95373 1038 aaKnown RBP28.35■■■□□ 2.13
CGREF1-204ENST00000402550 CFHP08603 1231 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 ALDH1A3P47895 512 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 KIF11P52732 1056 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 SLC18A3Q16572 532 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 PPP1R2P3Q6NXS1 205 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 DENND1BQ6P3S1 775 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 TTC30AQ86WT1 665 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 TMEM139Q8IV31 216 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 CMASQ8NFW8 434 aaPredicted RBP28.35■■■□□ 2.13
CGREF1-204ENST00000402550 ZNF707Q96C28 371 aaPredicted RBP28.35■■■□□ 2.13
CGREF1-204ENST00000402550 APOL5Q9BWW9 433 aa28.35■■■□□ 2.13
CGREF1-204ENST00000402550 DMAP1Q9NPF5 467 aaPredicted RBP28.35■■■□□ 2.13
CGREF1-204ENST00000402550 LRG1P02750 347 aa28.34■■■□□ 2.13
CGREF1-204ENST00000402550 GRIK1P39086 918 aa28.34■■■□□ 2.13
CGREF1-204ENST00000402550 TWF1Q12792 350 aa28.34■■■□□ 2.13
CGREF1-204ENST00000402550 RARS2Q5T160 578 aaKnown RBP28.34■■■□□ 2.13
CGREF1-204ENST00000402550 SECISBP2LQ93073 1101 aaKnown RBP28.34■■■□□ 2.13
CGREF1-204ENST00000402550 PRDM6Q9NQX0 595 aa28.34■■■□□ 2.13
CGREF1-204ENST00000402550 TMEM30AQ9NV96 361 aa28.34■■■□□ 2.13
CGREF1-204ENST00000402550 DDX3XO00571 662 aaKnown RBP eCLIP28.33■■■□□ 2.132e-11■■■□□ 18.1
CGREF1-204ENST00000402550 TRIM66O15016 1216 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 CCL16O15467 120 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 ARHGAP6O43182 974 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 CYP1A1P04798 512 aaPredicted RBP28.33■■■□□ 2.13
CGREF1-204ENST00000402550 ATF6P18850 670 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 CACNA2D1P54289 1103 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 DDR2Q16832 855 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 PKDCCQ504Y2 493 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 CLEC20AQ6ZU45 233 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 ADAM7Q9H2U9 754 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 C5orf42Q9H799 3197 aa28.33■■■□□ 2.13
CGREF1-204ENST00000402550 A0A087X0T9 212 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 FAM228BP0C875 321 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 CDH5P33151 784 aaPredicted RBP28.33■■■□□ 2.12
CGREF1-204ENST00000402550 GPD2P43304 727 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 NSFP46459 744 aaKnown RBP28.33■■■□□ 2.12
CGREF1-204ENST00000402550 MAP3K7CLP57077 242 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 RPL10AP62906 217 aaKnown RBP28.33■■■□□ 2.12
CGREF1-204ENST00000402550 ITIH3Q06033 890 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 GFPT1Q06210 699 aaPredicted RBP28.33■■■□□ 2.12
CGREF1-204ENST00000402550 PDE4CQ08493 712 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 CLUL1Q15846 466 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 CLEC16AQ2KHT3 1053 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 ASTE1Q2TB18 679 aaPredicted RBP28.33■■■□□ 2.12
CGREF1-204ENST00000402550 NAA35Q5VZE5 725 aa28.33■■■□□ 2.12
CGREF1-204ENST00000402550 SCN4BQ8IWT1 228 aa28.33■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms