RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 H3BQ06 376 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 TNFRSF10BO14763 440 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 CCL16O15467 120 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 GABBR2O75899 941 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 KCNA5P22460 613 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 HNRNPH3P31942 346 aaKnown RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PRKCIP41743 596 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 ALDH1A3P47895 512 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PDE6CP51160 858 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 FMO1Q01740 532 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 MTMR3Q13615 1198 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 STILQ15468 1287 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PPM1LQ5SGD2 360 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PMF1Q6P1K2 205 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PASD1Q8IV76 773 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 DRC7Q8IY82 874 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 HLA-CQ95604 372 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 MSLNLQ96KJ4 702 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 C8orf48Q96LL4 319 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 APOL5Q9BWW9 433 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 DMAP1Q9NPF5 467 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 ABHD10Q9NUJ1 306 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 DPP7Q9UHL4 492 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 FAM170AA1A519 330 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 AKR1B15C9JRZ8 316 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 M0QYV0 167 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 MED7O43513 233 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PAPLNO95428 1278 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PLEKP08567 350 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 CDR2Q01850 454 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 TFF2Q03403 129 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 ASIC2Q16515 512 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 RTL10Q7L3V2 364 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 GPRIN1Q7Z2K8 1008 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 ZNF571Q7Z3V5 609 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 SCAMP5Q8TAC9 235 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 SECISBP2LQ93073 1101 aaKnown RBP16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PCDHB18PQ96TA0 734 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 PRKD2Q9BZL6 878 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 S1PR5Q9H228 398 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 ZDHHC7Q9NXF8 308 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 HESX1Q9UBX0 185 aa16.86■□□□□ 0.29
HMGA1-204ENST00000401473 HOXA9P31269 272 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 BCAT1P54687 386 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 USP46P62068 366 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 BST2Q10589 180 aaKnown RBP16.85■□□□□ 0.29
HMGA1-204ENST00000401473 CLUL1Q15846 466 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 DNAJB7Q7Z6W7 309 aaPredicted RBP16.85■□□□□ 0.29
HMGA1-204ENST00000401473 PIGZQ86VD9 579 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 SPATA17Q96L03 361 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 HCFC1R1Q9NWW0 138 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
HMGA1-204ENST00000401473 TRIM66O15016 1216 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 LRG1P02750 347 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 CCDC172P0C7W6 258 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 HMGA1P17096 107 aaKnown RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 RPL10AP62906 217 aaKnown RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 KLHL30Q0D2K2 578 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 RARS2Q5T160 578 aaKnown RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 ZNF677Q86XU0 584 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 PSMG2Q969U7 264 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 CHP1Q99653 195 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 AGPAT1Q99943 283 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 LHX5Q9H2C1 402 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 SFXN1Q9H9B4 322 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 ATP8B3O60423 1300 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 NRG2O14511 850 aaPredicted RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 XPO1O14980 1071 aaKnown RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 TPM1P09493 284 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 HNRNPA1P09651 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 HOXB8P17481 243 aaPredicted RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 PLA2G4AP47712 749 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 EPHB3P54753 998 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 MEA1Q16626 185 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 DENND5BQ6ZUT9 1274 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 LRRC3Q9BY71 257 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 UBXN6Q9BZV1 441 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 DZANK1Q9NVP4 752 aa16.84■□□□□ 0.29
HMGA1-204ENST00000401473 DNMT3BQ9UBC3 853 aaKnown RBP16.84■□□□□ 0.29
HMGA1-204ENST00000401473 SLC38A8A6NNN8 435 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 SERPING1P05155 500 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 RGS7P49802 495 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 SLC5A3P53794 718 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 RAB41Q5JT25 222 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 FMNL3Q8IVF7 1028 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 HS6ST3Q8IZP7 471 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 NUP93Q8N1F7 819 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 SMRP1Q8NCR6 262 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 CMASQ8NFW8 434 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-204ENST00000401473 PNPLA8Q9NP80 782 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 IMPACTQ9P2X3 320 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 TJP2Q9UDY2 1190 aa16.83■□□□□ 0.28
HMGA1-204ENST00000401473 PIK3R2O00459 728 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 CYP1A1P04798 512 aaPredicted RBP16.82■□□□□ 0.28
HMGA1-204ENST00000401473 SETSIPP0DME0 302 aa16.82■□□□□ 0.28
HMGA1-204ENST00000401473 ANXA13P27216 316 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms