RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 RFC2P35250 354 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 ARSEP51690 589 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 TMPRSS15P98073 1019 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 TRMT11Q7Z4G4 463 aaKnown RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 CCNYL1Q8N7R7 359 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 CYFIP2Q96F07 1278 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 TMEM176AQ96HP8 235 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 PDE11AQ9HCR9 933 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 VPS51Q9UID3 782 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 APOBEC2Q9Y235 224 aaKnown RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 BTBD19C9JJ37 291 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 RBAK-RBAKDNI3L0D1 243 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 CLASP2O75122 1294 aaKnown RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 GRAP2O75791 330 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 ALOX15P16050 662 aaPredicted RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 RRM1P23921 792 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 GRIK3Q13003 919 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 PDIA2Q13087 525 aaKnown RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 SPARCL1Q14515 664 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 MORF4L2Q15014 288 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 GET4Q7L5D6 327 aaPredicted RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 PLPPR4Q7Z2D5 763 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 SPATA18Q8TC71 538 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 MED4Q9NPJ6 270 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 CPSF2Q9P2I0 782 aaKnown RBP8.27□□□□□ -1.09
USP47-203ENST00000399455 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 SLC45A1Q9Y2W3 748 aa8.27□□□□□ -1.09
USP47-203ENST00000399455 DARSP14868 501 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 CHRM3P20309 590 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 AKAP5P24588 427 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 CXCR5P32302 372 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 GUCA1AP43080 201 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 CCDC38Q502W7 563 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 ZNF513Q8N8E2 541 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 HELQQ8TDG4 1101 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 APOL5Q9BWW9 433 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 NMRK2Q9NPI5 230 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 CBX4O00257 560 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 PSMA3P25788 255 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 SERPINB9P50453 376 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 TKTL1P51854 596 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 PDCD2Q16342 344 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 BOLA3Q53S33 107 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 RBM23Q86U06 439 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 IFNL1Q8IU54 200 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 AGAP3Q96P47 875 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 TBC1D13Q9NVG8 400 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 TARSL2A2RTX5 802 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 KRT87PA6NCN2 255 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 TYK2P29597 1187 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 AARSP49588 968 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP47-203ENST00000399455 MRNIPQ6NTE8 343 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 C11orf96Q7Z7L8 435 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 CLYBLQ8N0X4 340 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 C11orf84Q9BUA3 381 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 YY1AP1Q9H869 796 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 C20orf96Q9NUD7 363 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 POLBP06746 335 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 DHX34Q14147 1143 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 HIF1AQ16665 826 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 TEDDM1Q5T9Z0 273 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 TRIM65Q6PJ69 517 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 DCLRE1AQ6PJP8 1040 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 LRRC8DQ7L1W4 858 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 RD3Q7Z3Z2 195 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 FEZF2Q8TBJ5 459 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 RUSC1Q9BVN2 902 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 BARX2Q9UMQ3 279 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 STK38LQ9Y2H1 464 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 FAM208AQ9UK61 1670 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 CCDC78A2IDD5 438 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 MUM1Q2TAK8 710 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 FBXL19Q6PCT2 694 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 GBP7Q8N8V2 638 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 TMC2Q8TDI7 906 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 PI4K2AQ9BTU6 479 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 AASDHPPTQ9NRN7 309 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 WWOXQ9NZC7 414 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 A0A088AWK7 358 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 LSM8O95777 96 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 ZNF10P21506 573 aaPredicted RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 ITGA9Q13797 1035 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 SYCP2LQ5T4T6 812 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP47-203ENST00000399455 MMGT1Q8N4V1 131 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 EXD1Q8NHP7 514 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 MAGEC3Q8TD91 643 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 KLRG1Q96E93 195 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 AGPAT3Q9NRZ7 376 aa8.26□□□□□ -1.09
USP47-203ENST00000399455 LIMA1Q9UHB6 759 aaKnown RBP8.26□□□□□ -1.09
USP47-203ENST00000399455 E2F6O75461 281 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 MAP2K2P36507 400 aa8.25□□□□□ -1.09
USP47-203ENST00000399455 CNTN1Q12860 1018 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms