RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PAPSS1O43252 624 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 PROSCO94903 275 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 LINC00271P0C7V0 271 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 KRT3P12035 628 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 TCP1P17987 556 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 MESDQ14696 234 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 RTP2Q5QGT7 225 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 RASIP1Q5U651 963 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 FAM183BPQ6ZVS7 135 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 DCP1BQ8IZD4 617 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 COLGALT1Q8NBJ5 622 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 PHOSPHO2Q8TCD6 241 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 BTBD6Q96KE9 485 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 SLC9A7Q96T83 725 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 YME1L1Q96TA2 773 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 TTPALQ9BTX7 342 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 CHST7Q9NS84 486 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 HYOU1Q9Y4L1 999 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 PLXNA3P51805 1871 aa20.52■□□□□ 0.88
PDLIM2-205ENST00000397761 MIF4GDA9UHW6 222 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 H7C4K7 107 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 AP1G2O75843 785 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 GJB6O95452 261 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 SYN1P17600 705 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 COMTP21964 271 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 SLC1A1P43005 524 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 ZNF252P-AS1Q0IIN9 211 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 RPS6KA1Q15418 735 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 NFE2Q16621 373 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 USP41Q3LFD5 358 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 CFAP221Q4G0U5 840 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 CTXN3Q4LDR2 81 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 C4orf50Q6ZRC1 276 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 ANKS3Q6ZW76 656 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 TAS1R1Q7RTX1 841 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 NIPA2Q8N8Q9 360 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 SP7Q8TDD2 431 aaPredicted RBP20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 FUBP3Q96I24 572 aaKnown RBP eCLIP20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 MCEEQ96PE7 176 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 OSBPL9Q96SU4 736 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 SELENOOQ9BVL4 669 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 PNPLA8Q9NP80 782 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 IP6K2Q9UHH9 426 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 TMEM59LQ9UK28 342 aa20.51■□□□□ 0.87
PDLIM2-205ENST00000397761 HHLA1C9JL84 531 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 GOLGA8SH3BPF8 625 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 CES2O00748 559 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 RFC1P35251 1148 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 CACNA2D1P54289 1103 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 SLC6A3Q01959 620 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 OGDHQ02218 1023 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 RAB41Q5JT25 222 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 DCUN1D2Q6PH85 259 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 ARCQ7LC44 396 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 PIK3R5Q8WYR1 880 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 KHSRPQ92945 711 aaKnown RBP eCLIP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 B3GALT6Q96L58 329 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 ZMYND8Q9ULU4 1186 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 PACSIN2Q9UNF0 486 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 INSL6Q9Y581 213 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 DDX3YO15523 660 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 SOD2P04179 222 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 WHAMMP3Q1A5X7 153 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 OR6B2Q6IFH4 312 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 SLC26A9Q7LBE3 791 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 CEP57Q86XR8 500 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 HERC6Q8IVU3 1022 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 SCUBE3Q8IX30 993 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 JOSD2Q8TAC2 188 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 CLP1Q92989 425 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 PIWIL1Q96J94 861 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 METTL5Q9NRN9 209 aaKnown RBP20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 SPG21Q9NZD8 308 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 MTRRQ9UBK8 725 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 BACE2Q9Y5Z0 518 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 SLC4A7Q9Y6M7 1214 aa20.5■□□□□ 0.87
PDLIM2-205ENST00000397761 RIOK3O14730 519 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 OR4Q2P0C623 313 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 BDNFP23560 247 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 CTNNA2P26232 953 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 PPM1AP35813 382 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 MAP3K7CLP57077 242 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 SMARCB1Q12824 385 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 GPR17Q13304 367 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 PIGHQ14442 188 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 SLC39A12Q504Y0 691 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 SPOUT1Q5T280 376 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 FAM102AQ5T9C2 384 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 DDX53Q86TM3 631 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 TMEM169Q96HH4 297 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 KCNK16Q96T55 309 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 RAD9AQ99638 391 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 HERC2P3Q9BVR0 1158 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 RHOBTB2Q9BYZ6 727 aa20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 DMAP1Q9NPF5 467 aaPredicted RBP20.49■□□□□ 0.87
PDLIM2-205ENST00000397761 TMEM110-MUSTN1A8MSY1 372 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 PIK3R2O00459 728 aa20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 CTNNA1P35221 906 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-205ENST00000397761 MAGEA11P43364 429 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms