RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SLC8A3P57103 927 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RPL10AP62906 217 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 HYAL1Q12794 435 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCDC149Q6ZUS6 474 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RTL10Q7L3V2 364 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SCN4BQ8IWT1 228 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCDC112Q8NEF3 446 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PLEKHA4Q9H4M7 779 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PNPLA8Q9NP80 782 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 MAN1C1Q9NR34 630 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ADAMTS1Q9UHI8 967 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CYTH4Q9UIA0 394 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 NENFQ9UMX5 172 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 INSL5Q9Y5Q6 135 aa20.57■□□□□ 0.88
MAP1LC3A-203ENST00000397709 A0A087X0T9 212 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PTMAP06454 111 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 C8AP07357 584 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 FAM228BP0C875 321 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ATF6P18850 670 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GTF2F1P35269 517 aaKnown RBP eCLIP20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RPL34P49207 117 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 KIF11P52732 1056 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CENPCQ03188 943 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PDCLQ13371 301 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 DDR2Q16832 855 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 LIN9Q5TKA1 542 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 NAA35Q5VZE5 725 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PMF1Q6P1K2 205 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 Q7L0L9 218 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PIGZQ86VD9 579 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCDC170Q8IYT3 715 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 VN1R2Q8NFZ6 395 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SLC7A14Q8TBB6 771 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 STK32AQ8WU08 396 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SPATA17Q96L03 361 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCDC42Q96M95 316 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CEP295NLQ96MC4 621 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GAS2L1Q99501 681 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 DEF6Q9H4E7 631 aa20.56■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SOWAHDA6NJG2 315 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 AKR1B10O60218 316 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GZMAP12544 262 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PLD1Q13393 1074 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SLC18A3Q16572 532 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SDHAF4Q5VUM1 108 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 LLGL2Q6P1M3 1020 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 EFHBQ8N7U6 833 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 KCTD13Q8WZ19 329 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 HSFY1Q96LI6 401 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 NOX5Q96PH1 765 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SLC4A5Q9BY07 1137 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CYLDQ9NQC7 956 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 TAS2R14Q9NYV8 317 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 DPP7Q9UHL4 492 aa20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PRRC2BQ5JSZ5 2229 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3A-203ENST00000397709 TNFRSF10BO14763 440 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ZMYND10O75800 440 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 IGFBP4P22692 258 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ALDH1A3P47895 512 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RGS7P49802 495 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCZ1BP86790 482 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CCZ1P86791 482 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RBM10P98175 930 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GFPT1Q06210 699 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 TWF1Q12792 350 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RAB41Q5JT25 222 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ACAD10Q6JQN1 1059 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RAD9BQ6WBX8 426 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 TMEM184AQ6ZMB5 413 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GPRIN1Q7Z2K8 1008 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CPA5Q8WXQ8 436 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CASP10Q92851 521 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 IGFLR1Q9H665 355 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 NAGPAQ9UK23 515 aa20.54■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GABBR2O75899 941 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PAPLNO95428 1278 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GLP2RO95838 553 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 HOXA9P31269 272 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CYLC1P35663 651 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 NSFP46459 744 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PTPN20Q4JDL3 420 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PPM1LQ5SGD2 360 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PPP1R2P3Q6NXS1 205 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 ELMSAN1Q6PJG2 1045 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 TMEM110Q86TL2 294 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PHF13Q86YI8 300 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 PPP1R13BQ96KQ4 1090 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 GUCD1Q96NT3 240 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CPXM1Q96SM3 734 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 CDX2Q99626 313 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SPTLC3Q9NUV7 552 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 DZANK1Q9NVP4 752 aa20.53■□□□□ 0.88
MAP1LC3A-203ENST00000397709 SLC38A8A6NNN8 435 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 RTN2O75298 545 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 LCA5LO95447 670 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 LRG1P02750 347 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 POU2F2P09086 479 aa20.52■□□□□ 0.88
MAP1LC3A-203ENST00000397709 MMP8P22894 467 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms