RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 MTHFD1LQ6UB35 978 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 FGFR1OP2Q9NVK5 253 aa24.92■■□□□ 1.58
PABPN1-202ENST00000397276 ITGAVP06756 1048 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 ITIH4Q14624 930 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 ZKSCAN8Q15776 578 aaPredicted RBP24.91■■□□□ 1.58
PABPN1-202ENST00000397276 RNASEH2BQ5TBB1 312 aaKnown RBP24.91■■□□□ 1.58
PABPN1-202ENST00000397276 POLNQ7Z5Q5 900 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 SLC35B2Q8TB61 432 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 ACAP3Q96P50 834 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 PAIP2Q9BPZ3 127 aaKnown RBP24.91■■□□□ 1.58
PABPN1-202ENST00000397276 C16orf70Q9BSU1 422 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 DPP3Q9NY33 737 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 YBX3P16989 372 aaKnown RBP eCLIP24.91■■□□□ 1.58
PABPN1-202ENST00000397276 RGS7P49802 495 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 MMRN1Q13201 1228 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 KIZQ2M2Z5 673 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 ZNF792Q3KQV3 632 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 SYCP2LQ5T4T6 812 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 NUGGCQ68CJ6 796 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 DPY19L2Q6NUT2 758 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 NKD2Q969F2 451 aaPredicted RBP24.91■■□□□ 1.58
PABPN1-202ENST00000397276 KIF12Q96FN5 646 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 CFAP57Q96MR6 1250 aa24.91■■□□□ 1.58
PABPN1-202ENST00000397276 MAGEB2O15479 319 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 SPAG7O75391 227 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 RNF8O76064 485 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 C15orf59Q2T9L4 293 aaPredicted RBP24.9■■□□□ 1.58
PABPN1-202ENST00000397276 ANKRD22Q5VYY1 191 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 OR6B2Q6IFH4 312 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 ASB7Q9H672 318 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.9■■□□□ 1.58
PABPN1-202ENST00000397276 USP18Q9UMW8 372 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 TRIM33Q9UPN9 1127 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 PDHXO00330 501 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 TSPAN1O60635 241 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 CTCFP49711 727 aaPredicted RBP24.9■■□□□ 1.58
PABPN1-202ENST00000397276 ZNF268Q14587 947 aaPredicted RBP24.9■■□□□ 1.58
PABPN1-202ENST00000397276 CRYMQ14894 314 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 FAM187BQ17R55 369 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 PPTC7Q8NI37 304 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 RSAD2Q8WXG1 361 aa24.9■■□□□ 1.58
PABPN1-202ENST00000397276 TCEA3O75764 348 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 CYP3A5P20815 502 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 PTPN7P35236 360 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 NCALDP61601 193 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 RELL1Q8IUW5 271 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 UNC45BQ8IWX7 931 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 CCDC134Q9H6E4 229 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 KIF9Q9HAQ2 790 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 TSPAN16Q9UKR8 245 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 PNMA3Q9UL41 463 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 ANK1P16157 1881 aa24.89■■□□□ 1.58
PABPN1-202ENST00000397276 E5RJQ4 531 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 P4HA1P13674 534 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 STX2P32856 288 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 MORF4L2Q15014 288 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 NPNTQ6UXI9 565 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 LINC01465Q8N7H1 131 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 FAM49AQ9H0Q0 323 aaPredicted RBP24.89■■□□□ 1.57
PABPN1-202ENST00000397276 EBF2Q9HAK2 575 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 PCDH9Q9HC56 1237 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 WDR35Q9P2L0 1181 aa24.89■■□□□ 1.57
PABPN1-202ENST00000397276 SNX3O60493 162 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 GCAP28676 217 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 USP50Q70EL3 339 aaPredicted RBP24.88■■□□□ 1.57
PABPN1-202ENST00000397276 FAM71DQ8N9W8 422 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 PEBP4Q96S96 227 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 ECT2Q9H8V3 914 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 HES2Q9Y543 173 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 A0A1B0GUA9 196 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 IGF2BP3O00425 579 aaKnown RBP eCLIP24.88■■□□□ 1.57
PABPN1-202ENST00000397276 GSTA1P08263 222 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 VDRP11473 427 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 ATICP31939 592 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 ATP11AP98196 1134 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 DPP9Q86TI2 863 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 ZC3H18Q86VM9 953 aaKnown RBP24.88■■□□□ 1.57
PABPN1-202ENST00000397276 SHCBP1Q8NEM2 672 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 FNIP1Q8TF40 1166 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 BARX2Q9UMQ3 279 aaPredicted RBP24.88■■□□□ 1.57
PABPN1-202ENST00000397276 TRNP1Q6NT89 227 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 CENPUQ71F23 418 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 SETD4Q9NVD3 440 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 LGALS13Q9UHV8 139 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 STK38LQ9Y2H1 464 aa24.88■■□□□ 1.57
PABPN1-202ENST00000397276 TCRBV7S3A2A0A539 114 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 PPEF2O14830 753 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 SNAI1O95863 264 aaPredicted RBP24.87■■□□□ 1.57
PABPN1-202ENST00000397276 TRUB2O95900 331 aaKnown RBP24.87■■□□□ 1.57
PABPN1-202ENST00000397276 NQO1P15559 274 aaKnown RBP24.87■■□□□ 1.57
PABPN1-202ENST00000397276 PDGFRAP16234 1089 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 CCNA1P78396 465 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 RBP5P82980 135 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 GRIK4Q16099 956 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 BBS12Q6ZW61 710 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 MCRS1Q96EZ8 462 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 NSRP1Q9H0G5 558 aaKnown RBP24.87■■□□□ 1.57
PABPN1-202ENST00000397276 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.87■■□□□ 1.57
PABPN1-202ENST00000397276 FAM49BQ9NUQ9 324 aa24.87■■□□□ 1.57
PABPN1-202ENST00000397276 KRT15P19012 456 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms