RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 R4GN57 208 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 ANAPC1Q9H1A4 1944 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 DMDP11532 3685 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 COL4A2P08572 1712 aa14.83□□□□□ -0.04
SEC13-204ENST00000397099 MYH10P35580 1976 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 F8VP50 259 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 TCF3P15923 654 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 CCNE1P24864 410 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 GCLMP48507 274 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 GPR15P49685 360 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 MXI1P50539 228 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 KPNA1P52294 538 aaPredicted RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 INCA1Q0VD86 236 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 PPP2R5DQ14738 602 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 WDR44Q5JSH3 913 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 CC2D1AQ6P1N0 951 aaPredicted RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 ZC3H14Q6PJT7 736 aaKnown RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 MAMSTRQ6ZN01 415 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 SMYD4Q8IYR2 804 aaPredicted RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 NUP93Q8N1F7 819 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 FBXL13Q8NEE6 735 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 CEP63Q96MT8 703 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 NIF3L1Q9GZT8 377 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 DMAP1Q9NPF5 467 aaPredicted RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 ARMCX3Q9UH62 379 aaPredicted RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 PIAS3Q9Y6X2 628 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 NCANO14594 1321 aa14.82□□□□□ -0.04
SEC13-204ENST00000397099 KIF26AQ9ULI4 1882 aaPredicted RBP14.82□□□□□ -0.04
SEC13-204ENST00000397099 COL4A3Q01955 1670 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 LAMTOR5O43504 91 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 HCRTO43612 131 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 CKMP06732 381 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 SP9P0CG40 484 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 TRIM49P0CI25 452 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 TRIM49CP0CI26 452 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 ASPAP45381 313 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 CDH8P55286 799 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 PPP3CAQ08209 521 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 CETN1Q12798 172 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 LRRC32Q14392 662 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 PDGFRLQ15198 375 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 ITPRIPL2Q3MIP1 535 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 ZNF528Q3MIS6 628 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 SDHAF4Q5VUM1 108 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 SCARA5Q6ZMJ2 495 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 TRIML1Q8N9V2 468 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 STKLD1Q8NE28 680 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 FAM3CQ92520 227 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 MED10Q9BTT4 135 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 NT5C1AQ9BXI3 368 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 B3GNT5Q9BYG0 378 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 DPEP3Q9H4B8 488 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 FBXO4Q9UKT5 387 aa14.81□□□□□ -0.04
SEC13-204ENST00000397099 NDRG2Q9UN36 371 aaKnown RBP14.81□□□□□ -0.04
SEC13-204ENST00000397099 HELZP42694 1942 aaKnown RBP14.8□□□□□ -0.04
SEC13-204ENST00000397099 PRAMEF12O95522 483 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 FGFR1OPO95684 399 aaKnown RBP14.8□□□□□ -0.04
SEC13-204ENST00000397099 GNA14O95837 355 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 HDCP19113 662 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 TARSP26639 723 aaKnown RBP14.8□□□□□ -0.04
SEC13-204ENST00000397099 NDST1P52848 882 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 YWHAEP62258 255 aaKnown RBP14.8□□□□□ -0.04
SEC13-204ENST00000397099 TXNDC8Q6A555 127 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 ANKRD40Q6AI12 368 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 FILIP1Q7Z7B0 1213 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 FAM35AQ86V20 835 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 DDX42Q86XP3 938 aaKnown RBP eCLIP14.8□□□□□ -0.04
SEC13-204ENST00000397099 GPIHBP1Q8IV16 184 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 SYNPOQ8N3V7 929 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 TAS1R2Q8TE23 839 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 USP13Q92995 863 aaPredicted RBP14.8□□□□□ -0.04
SEC13-204ENST00000397099 RSPRY1Q96DX4 576 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 FBXO44Q9H4M3 255 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 CSNK1G1Q9HCP0 422 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 PNPLA8Q9NP80 782 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 RAB20Q9NX57 234 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 ARHGAP26Q9UNA1 814 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 PATJQ8NI35 1801 aa14.8□□□□□ -0.04
SEC13-204ENST00000397099 PMM2O15305 246 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 TADA3O75528 432 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 LMNAP02545 664 aaKnown RBP14.79□□□□□ -0.04
SEC13-204ENST00000397099 YWHAQP27348 245 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 CSTF1Q05048 431 aaKnown RBP14.79□□□□□ -0.04
SEC13-204ENST00000397099 MORC3Q14149 939 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 DGKKQ5KSL6 1271 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 TCERG1LQ5VWI1 586 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 ACOT1Q86TX2 421 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 CFAP54Q96N23 3096 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 HINFPQ9BQA5 517 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 FAM83CQ9BQN1 747 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 FAM126AQ9BYI3 521 aaPredicted RBP14.79□□□□□ -0.04
SEC13-204ENST00000397099 ZNF518BQ9C0D4 1074 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 SDCBP2Q9H190 292 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 TRPC7Q9HCX4 862 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 IL37Q9NZH6 218 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 MAN1B1Q9UKM7 699 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 COQ4Q9Y3A0 265 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 NME7Q9Y5B8 376 aa14.79□□□□□ -0.04
SEC13-204ENST00000397099 ZNF840PA6NDX5 716 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms