RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 RGS9BPQ6ZS82 235 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 BBS12Q6ZW61 710 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 NIPA2Q8N8Q9 360 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 UBA3Q8TBC4 463 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 FAM111AQ96PZ2 611 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 ASCC2Q9H1I8 757 aaPredicted RBP19.23■□□□□ 0.67
IFFO1-204ENST00000396840 R3HDMLQ9H3Y0 253 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 SMYD3Q9H7B4 428 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 FBXO6Q9NRD1 293 aaPredicted RBP19.23■□□□□ 0.67
IFFO1-204ENST00000396840 CPSF3Q9UKF6 684 aaKnown RBP19.23■□□□□ 0.67
IFFO1-204ENST00000396840 LPXNO60711 386 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 RFC5P40937 340 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 RAD23BP54727 409 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 SESN3P58005 492 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 KBTBD12Q3ZCT8 623 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 DARS2Q6PI48 645 aaKnown RBP19.23■□□□□ 0.67
IFFO1-204ENST00000396840 C1orf228Q6PIY5 440 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 AGGF1Q8N302 714 aaeCLIP19.23■□□□□ 0.67
IFFO1-204ENST00000396840 SERAC1Q96JX3 654 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 MANSC1Q9H8J5 431 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 KANSL3Q9P2N6 904 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 STRIP2Q9ULQ0 834 aa19.23■□□□□ 0.67
IFFO1-204ENST00000396840 KBTBD13C9JR72 458 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 PEX11AO75192 247 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 MAFO75444 373 aaPredicted RBP19.22■□□□□ 0.67
IFFO1-204ENST00000396840 TNNC2P02585 160 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 MT-ND3P03897 115 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 POLR2BP30876 1174 aaKnown RBP19.22■□□□□ 0.67
IFFO1-204ENST00000396840 PTPN7P35236 360 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 YWHAEP62258 255 aaKnown RBP19.22■□□□□ 0.67
IFFO1-204ENST00000396840 PTK7Q13308 1070 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 RFWD3Q6PCD5 774 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 CLNKQ7Z7G1 428 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 SDCBP2Q9H190 292 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 HEY2Q9UBP5 337 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 PCDHGC3Q9UN70 934 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 IKBKGQ9Y6K9 419 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 TROVE2P10155 538 aaKnown RBP eCLIP19.22■□□□□ 0.67
IFFO1-204ENST00000396840 SLC18A1P54219 525 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 ZNF280AP59817 542 aaPredicted RBP19.22■□□□□ 0.67
IFFO1-204ENST00000396840 DPYSL3Q14195 570 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 CRYMQ14894 314 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 POLNQ7Z5Q5 900 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 XYLT1Q86Y38 959 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 BANPQ8N9N5 519 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 MZB1Q8WU39 189 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 CFAP36Q96G28 342 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 CYLDQ9NQC7 956 aa19.22■□□□□ 0.67
IFFO1-204ENST00000396840 MCF2LO15068 1137 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 ATP5HO75947 161 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 PYGBP11216 843 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 FAAP100Q0VG06 881 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 PARP6Q2NL67 630 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 C15orf59Q2T9L4 293 aaPredicted RBP19.21■□□□□ 0.67
IFFO1-204ENST00000396840 KLHL38Q2WGJ6 581 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 HSDL1Q3SXM5 330 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 FAM102AQ5T9C2 384 aaPredicted RBP19.21■□□□□ 0.67
IFFO1-204ENST00000396840 NCAPG2Q86XI2 1143 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 CTAGE3PQ8IX95 158 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 ZNF276Q8N554 614 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 MICAL1Q8TDZ2 1067 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 PEBP4Q96S96 227 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 DENND2DQ9H6A0 471 aaPredicted RBP19.21■□□□□ 0.67
IFFO1-204ENST00000396840 RNPEPL1Q9HAU8 725 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.21■□□□□ 0.67
IFFO1-204ENST00000396840 DONSONQ9NYP3 566 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 USP18Q9UMW8 372 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 IGKV6D-21A0A0A0MT36 114 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 TCRBV9S1A1TA0A576 114 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 M0QYV0 167 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 NFICP08651 508 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 BGNP21810 368 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 CDH5P33151 784 aaPredicted RBP19.21■□□□□ 0.67
IFFO1-204ENST00000396840 CDH6P55285 790 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 ZBTB8OSQ8IWT0 167 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 CCDC33Q8N5R6 958 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 ANKRD36BP1Q96IX9 119 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 PIWIL1Q96J94 861 aaKnown RBP19.21■□□□□ 0.67
IFFO1-204ENST00000396840 TSSK1BQ9BXA7 367 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 HOXC10Q9NYD6 342 aa19.21■□□□□ 0.67
IFFO1-204ENST00000396840 RNF8O76064 485 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 LCTP09848 1927 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 EFNA5P52803 228 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 AP3M2P53677 418 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 ZBTB16Q05516 673 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 ZNF667Q5HYK9 610 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 TREML2Q5T2D2 321 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 PRPF39Q86UA1 669 aaKnown RBP19.2■□□□□ 0.66
IFFO1-204ENST00000396840 TTC13Q8NBP0 860 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 MIPEPQ99797 713 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 GPATCH2LQ9NWQ4 482 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 H7C0C1 242 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 ITGB3P05106 788 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 SERPINB3P29508 390 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 ATP5OP48047 213 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 ERFP50548 548 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 FAM160B1Q5W0V3 765 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
IFFO1-204ENST00000396840 INPP5DQ92835 1189 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms