RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SLITRK1Q96PX8 696 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 MRPL47Q9HD33 250 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 PI4KBQ9UBF8 816 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 SLC7A8Q9UHI5 535 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 PCDHB2Q9Y5E7 798 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 SLC4A7Q9Y6M7 1214 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CDK5RAP2Q96SN8 1893 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 HNRNPCL1O60812 293 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ELK3P41970 407 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 C1QTNF8P60827 252 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 OTUD4Q01804 1114 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 UGCGQ16739 394 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 SPOCD1Q6ZMY3 1216 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CDHR3Q6ZTQ4 885 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 LDHDQ86WU2 507 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 KATNAL2Q8IYT4 538 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 FEZF2Q8TBJ5 459 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 SKA1Q96BD8 255 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 MPP4Q96JB8 637 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 MMP19Q99542 508 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 APOL6Q9BWW8 343 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 KCNH7Q9NS40 1196 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 TBX20Q9UMR3 447 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ATRNL1Q5VV63 1379 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 TRIM49D1C9J1S8 452 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 PSTPIP1O43586 416 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 CST8O60676 142 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 TOM1L1O75674 476 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ZMPSTE24O75844 475 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 TOP3BO95985 862 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 P4HBP07237 508 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 C6orf222P0C671 652 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ATP6V1B1P15313 513 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ITGB5P18084 799 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 ATXN3P54252 364 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 VCPP55072 806 aaKnown RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 BST1Q10588 318 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 RALGPS1Q5JS13 557 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 EFHC2Q5JST6 749 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 STRIP1Q5VSL9 837 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 SCARA3Q6AZY7 606 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 RSPH3Q86UC2 560 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 TDRPQ86YL5 185 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 TMPRSS6Q8IU80 811 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 APLFQ8IW19 511 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-203ENST00000396547 RCOR2Q8IZ40 523 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 PDIK1LQ8N165 341 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 IL31RAQ8NI17 732 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 FAM81BQ96LP2 452 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 VPS11Q9H270 941 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 GALNT8Q9NY28 637 aa10.28□□□□□ -0.76
TRIM39-203ENST00000396547 E2F8A0AVK6 867 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 HLA-DRAP01903 254 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 NPTX2P47972 431 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 GPC3P51654 580 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 USP46P62068 366 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 CXCL9Q07325 125 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 MED21Q13503 144 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 TRIP10Q15642 601 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 MMEL1Q495T6 779 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 CMPK2Q5EBM0 449 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 CIAPIN1Q6FI81 312 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 SH3BP5LQ7L8J4 393 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 ZNF276Q8N554 614 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 SNRNP27Q8WVK2 155 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 CPT1BQ92523 772 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 SENP7Q9BQF6 1050 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 EBF4Q9BQW3 602 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 STRA6Q9BX79 667 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 TDRD3Q9H7E2 651 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 GPRC5DQ9NZD1 345 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 HACL1Q9UJ83 578 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 FOCADQ5VW36 1801 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 F5H423 210 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 EIF2AK2P19525 551 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 RPL22P35268 128 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 QARSP47897 775 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 NCOA4Q13772 614 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 AOC3Q16853 763 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 SFT2D3Q587I9 215 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 TCHHL1Q5QJ38 904 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 DNAJC24Q6P3W2 148 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 TMEM179Q6ZVK1 233 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 MON1BQ7L1V2 547 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 SPATA24Q86W54 205 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 NUDCD3Q8IVD9 361 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 UNC45BQ8IWX7 931 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 DCAKDQ8WVC6 231 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 ZNF516Q92618 1163 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 TRIM56Q9BRZ2 755 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 PHACTR1Q9C0D0 580 aa10.27□□□□□ -0.77
TRIM39-203ENST00000396547 RPL26L1Q9UNX3 145 aaKnown RBP10.27□□□□□ -0.77
TRIM39-203ENST00000396547 IQANK1A0A1B0GTG1 560 aa10.26□□□□□ -0.77
TRIM39-203ENST00000396547 KBTBD13C9JR72 458 aa10.26□□□□□ -0.77
TRIM39-203ENST00000396547 TMEM63AO94886 807 aa10.26□□□□□ -0.77
TRIM39-203ENST00000396547 CYP24A1Q07973 514 aa10.26□□□□□ -0.77
TRIM39-203ENST00000396547 DMP1Q13316 513 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms