RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 TKTL1P51854 596 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 CDH8P55286 799 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 PTGISQ16647 500 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 HYIQ5T013 277 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 EPS8L3Q8TE67 593 aaKnown RBP17.25■□□□□ 0.35
SCN3B-202ENST00000392770 CCT8L2Q96SF2 557 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 TINF2Q9BSI4 451 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 CPSF2Q9P2I0 782 aaKnown RBP17.25■□□□□ 0.35
SCN3B-202ENST00000392770 MYO1CO00159 1063 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 SNRPAP09012 282 aaKnown RBP17.25■□□□□ 0.35
SCN3B-202ENST00000392770 SLC2A3P11169 496 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 MCL1Q07820 350 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 UGP2Q16851 508 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 POTEAQ6S8J7 498 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 SGSM3Q96HU1 749 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 NSMCE4AQ9NXX6 385 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 USH1CQ9Y6N9 552 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 FRMD3A2A2Y4 597 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 LMNAP02545 664 aaKnown RBP17.25■□□□□ 0.35
SCN3B-202ENST00000392770 RAB27AP51159 221 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 ALDH18A1P54886 795 aaKnown RBP17.25■□□□□ 0.35
SCN3B-202ENST00000392770 NAPEPLDQ6IQ20 393 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 LRRN4CLQ8ND94 238 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 FBXO32Q969P5 355 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 STAMBPL1Q96FJ0 436 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 KCTD10Q9H3F6 313 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 FAM8A1Q9UBU6 413 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
SCN3B-202ENST00000392770 DCDC2CA8MYV0 355 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 NCKAP1LP55160 1127 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 TSPAN17Q96FV3 270 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 FGD4Q96M96 766 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 PABPC3Q9H361 631 aaKnown RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 CCDC22O60826 627 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 ATXN8OSP0DMR3 200 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 H2AFXP16104 143 aaPredicted RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 LAMB3Q13751 1172 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 PRAMEF19Q5SWL8 479 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 ZNF384Q8TF68 577 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 SEPT8Q92599 483 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 SERPINB12Q96P63 405 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 MTIF3Q9H2K0 278 aaKnown RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 TASP1Q9H6P5 420 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 DYRK4Q9NR20 520 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 IRAK4Q9NWZ3 460 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 SETSIPP0DME0 302 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 ACAT1P24752 427 aaKnown RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 LVRNQ6Q4G3 990 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 GPR142Q7Z601 462 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 FAM131BQ86XD5 332 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 FUT8Q9BYC5 575 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 WWP1Q9H0M0 922 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 UPF3AQ9H1J1 476 aaKnown RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 TRPV2Q9Y5S1 764 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 MYPNQ86TC9 1320 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 HOXA2O43364 376 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 SPRP35270 261 aaPredicted RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 C1orf146Q5VVC0 180 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 FBXO36Q8NEA4 188 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 ETNK1Q9HBU6 452 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 L3MBTL1Q9Y468 752 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 EFHBQ8N7U6 833 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 LBHD1Q9BQE6 289 aaPredicted RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.24■□□□□ 0.35
SCN3B-202ENST00000392770 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 CNTNAP2Q9UHC6 1331 aa17.24■□□□□ 0.35
SCN3B-202ENST00000392770 SLIT2O94813 1529 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 GLI1P08151 1106 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 ARSHQ5FYA8 562 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 PPP1R13LQ8WUF5 828 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 SYT15Q9BQS2 421 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 ORC6Q9Y5N6 252 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 LSP1P33241 339 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 ATN1P54259 1190 aaPredicted RBP17.23■□□□□ 0.35
SCN3B-202ENST00000392770 CCNG2Q16589 344 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 GANQ9H2C0 597 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 A0A0U1RQJ8 604 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 H0Y3Z8 333 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 EPHB6O15197 1021 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 F9P00740 461 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 LRG1P02750 347 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 PAEPP09466 180 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 STX3Q13277 289 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 EFTUD2Q15029 972 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCN3B-202ENST00000392770 TAF2Q6P1X5 1199 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 ANGPTL8Q6UXH0 198 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 LINC00523Q86TU6 105 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 NT5DC4Q86YG4 428 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 SHCBP1Q8NEM2 672 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 SNX19Q92543 992 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 ZNF669Q96BR6 464 aaPredicted RBP17.23■□□□□ 0.35
SCN3B-202ENST00000392770 FRMD8Q9BZ67 464 aaPredicted RBP17.23■□□□□ 0.35
SCN3B-202ENST00000392770 XAB2Q9HCS7 855 aaKnown RBP17.23■□□□□ 0.35
SCN3B-202ENST00000392770 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 CALCAP01258 141 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 GHRP10912 638 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 PTENP60484 403 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 CAPSQ13938 189 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 MIPOL1Q8TD10 442 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms