RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 EMID1Q96A84 441 aaPredicted RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 CDCA5Q96FF9 252 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 SAE1Q9UBE0 346 aaPredicted RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 POC1B-GALNT4F8VUJ3 575 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 CD48P09326 243 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 FOXN2P32314 431 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 IGBP1P78318 339 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 RBP5P82980 135 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 CBLBQ13191 982 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 ORC1Q13415 861 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 PKN2Q16513 984 aaKnown RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 RNF43Q68DV7 783 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 LCLAT1Q6UWP7 414 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 MOB2Q70IA6 237 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 RFX6Q8HWS3 928 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 PARP9Q8IXQ6 854 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 PPTC7Q8NI37 304 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 GTF3C2Q8WUA4 911 aaPredicted RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 OPTNQ96CV9 577 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 HEXIM2Q96MH2 286 aaKnown RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 ADPGKQ9BRR6 497 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 CNPY3Q9BT09 278 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 PSMC3IPQ9P2W1 217 aaPredicted RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 RABGEF1Q9UJ41 708 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.66■□□□□ 0.1
SCFD2-201ENST00000388940 MGRN1O60291 552 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 GEMIN4P57678 1058 aaKnown RBP15.66■□□□□ 0.1
SCFD2-201ENST00000388940 STILQ15468 1287 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 WDR78Q5VTH9 848 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 MAP1SQ66K74 1059 aaPredicted RBP15.66■□□□□ 0.1
SCFD2-201ENST00000388940 MAMDC4Q6UXC1 1216 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 UNC45BQ8IWX7 931 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 ATP11CQ8NB49 1132 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 PYROXD1Q8WU10 500 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 CPB2Q96IY4 423 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 SMC6Q96SB8 1091 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 DHRS4Q9BTZ2 278 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 VTA1Q9NP79 307 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 PCSK1NQ9UHG2 260 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 AGAP1Q9UPQ3 857 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 CLUHO75153 1309 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 GPD1P21695 349 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 STIP1P31948 543 aaKnown RBP15.66■□□□□ 0.1
SCFD2-201ENST00000388940 MNAT1P51948 309 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 EIF3EP60228 445 aaKnown RBP15.66■□□□□ 0.1
SCFD2-201ENST00000388940 SPARCL1Q14515 664 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 ZNF792Q3KQV3 632 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 FAM102AQ5T9C2 384 aaPredicted RBP15.66■□□□□ 0.1
SCFD2-201ENST00000388940 ANKRD22Q5VYY1 191 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 CGB2Q6NT52 195 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 MAGEC3Q8TD91 643 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 DPP3Q9NY33 737 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 AKT3Q9Y243 479 aa15.66■□□□□ 0.1
SCFD2-201ENST00000388940 A0A1B0GUA9 196 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 C2CD4BA6NLJ0 364 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 MCF2LO15068 1137 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 CHUKO15111 745 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 KIF1CO43896 1103 aaKnown RBP15.65■□□□□ 0.1
SCFD2-201ENST00000388940 UBOX5O94941 541 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 KRT15P19012 456 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 PSMC4P43686 418 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 NDST1P52848 882 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 SF3A3Q12874 501 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCFD2-201ENST00000388940 BNIP1Q12981 228 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 FAM47CQ5HY64 1035 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 HP1BP3Q5SSJ5 553 aaPredicted RBP15.65■□□□□ 0.1
SCFD2-201ENST00000388940 FNBP1LQ5T0N5 605 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 ADGRD1Q6QNK2 874 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 MTHFD1LQ6UB35 978 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 TMEM130Q8N3G9 435 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 CCDC63Q8NA47 563 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 ACAP3Q96P50 834 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 ACSS3Q9H6R3 686 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 RXFP1Q9HBX9 757 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 STARD13Q9Y3M8 1113 aa15.65■□□□□ 0.1
SCFD2-201ENST00000388940 TYROBPO43914 113 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
SCFD2-201ENST00000388940 RBP3P10745 1247 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 ELF3P78545 371 aaPredicted RBP15.64■□□□□ 0.09
SCFD2-201ENST00000388940 CCDC15Q0P6D6 951 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 TTLL12Q14166 644 aaPredicted RBP15.64■□□□□ 0.09
SCFD2-201ENST00000388940 DPYSL3Q14195 570 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 NOMO1Q15155 1222 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 TAF5Q15542 800 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 SNCBQ16143 134 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 KLHL38Q2WGJ6 581 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 FAM133BQ5BKY9 247 aaKnown RBP15.64■□□□□ 0.09
SCFD2-201ENST00000388940 CYP4V2Q6ZWL3 525 aaPredicted RBP15.64■□□□□ 0.09
SCFD2-201ENST00000388940 CCDC91Q7Z6B0 441 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 AFG1LQ8WV93 481 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 HSPH1Q92598 858 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 PEBP4Q96S96 227 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 C16orf70Q9BSU1 422 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 PITPNM3Q9BZ71 974 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 GBA2Q9HCG7 927 aaPredicted RBP15.64■□□□□ 0.09
SCFD2-201ENST00000388940 KLHL14Q9P2G3 628 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 PLXNB2O15031 1838 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 GOLGA8MH3BSY2 632 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 TSPAN1O60635 241 aa15.64■□□□□ 0.09
SCFD2-201ENST00000388940 SPAG7O75391 227 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms