RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 TRPC3Q13507 836 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 SIM2Q14190 667 aaPredicted RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 ZNF268Q14587 947 aaPredicted RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 KCNB1Q14721 858 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 TMEM196Q5HYL7 178 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 TDRD10Q5VZ19 366 aaKnown RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 ABCA7Q8IZY2 2146 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 SECISBP2LQ93073 1101 aaKnown RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 ZNF518BQ9C0D4 1074 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 EXOC1Q9NV70 894 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 DUS2Q9NX74 493 aaKnown RBP15.11■□□□□ 0.01
SHOX-202ENST00000381575 RCOR1Q9UKL0 485 aa15.11■□□□□ 0.01
SHOX-202ENST00000381575 PVALEFA0A1B0GWK0 134 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
SHOX-202ENST00000381575 RNF40O75150 1001 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 PHACTR2O75167 634 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 PAPSS2O95340 614 aaPredicted RBP15.1■□□□□ 0.01
SHOX-202ENST00000381575 ABL1P00519 1130 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 SLFN14P0C7P3 912 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 PFKFB1P16118 471 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 PTPN1P18031 435 aaKnown RBP15.1■□□□□ 0.01
SHOX-202ENST00000381575 GJA4P35212 333 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 IFNAR2P48551 515 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 GALK1P51570 392 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 CDH8P55286 799 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 ZXDBP98169 803 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 GRSF1Q12849 480 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHOX-202ENST00000381575 KMT5BQ4FZB7 885 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 LAIR1Q6GTX8 287 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 VSTM1Q6UX27 236 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 DENND5BQ6ZUT9 1274 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 LONP2Q86WA8 852 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 FSIP1Q8NA03 581 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 OSCP1Q8WVF1 389 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 SPATA17Q96L03 361 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 LINC00597Q9H2U6 94 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
SHOX-202ENST00000381575 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHOX-202ENST00000381575 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.1■□□□□ 0.01
SHOX-202ENST00000381575 GON4LQ3T8J9 2241 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 CHD8Q9HCK8 2581 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 A8MXQ7 604 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 TRDMT1O14717 391 aaKnown RBP15.09■□□□□ 0.01
SHOX-202ENST00000381575 TACC1O75410 805 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 HDCP19113 662 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 DLG4P78352 724 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 FOXK2Q01167 660 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 ORC1Q13415 861 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 PUM1Q14671 1186 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHOX-202ENST00000381575 PDGFRLQ15198 375 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 MAPRE1Q15691 268 aaKnown RBP15.09■□□□□ 0.01
SHOX-202ENST00000381575 EML3Q32P44 896 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 CEP68Q76N32 757 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
SHOX-202ENST00000381575 C12orf56Q8IXR9 622 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 CPA6Q8N4T0 437 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 B3GALNT2Q8NCR0 500 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 EZH1Q92800 747 aaPredicted RBP15.09■□□□□ 0.01
SHOX-202ENST00000381575 HHIPQ96QV1 700 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 B3GNT5Q9BYG0 378 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 SDCBP2Q9H190 292 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 SMPD4Q9NXE4 827 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 DLL3Q9NYJ7 618 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 TRPM5Q9NZQ8 1165 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 CFAP45Q9UL16 551 aa15.09■□□□□ 0.01
SHOX-202ENST00000381575 ANTXRLA6NF34 631 aa15.08■□□□□ 0
SHOX-202ENST00000381575 TRIM66O15016 1216 aa15.08■□□□□ 0
SHOX-202ENST00000381575 VNN1O95497 513 aa15.08■□□□□ 0
SHOX-202ENST00000381575 PRR29P0C7W0 189 aa15.08■□□□□ 0
SHOX-202ENST00000381575 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
SHOX-202ENST00000381575 ZNF699Q32M78 642 aa15.08■□□□□ 0
SHOX-202ENST00000381575 ATL3Q6DD88 541 aa15.08■□□□□ 0
SHOX-202ENST00000381575 SYNPOQ8N3V7 929 aa15.08■□□□□ 0
SHOX-202ENST00000381575 PARD3BQ8TEW8 1205 aa15.08■□□□□ 0
SHOX-202ENST00000381575 ATP2A3Q93084 1043 aa15.08■□□□□ 0
SHOX-202ENST00000381575 P2RY13Q9BPV8 354 aa15.08■□□□□ 0
SHOX-202ENST00000381575 TTLL2Q9BWV7 592 aa15.08■□□□□ 0
SHOX-202ENST00000381575 ZDHHC9Q9Y397 364 aa15.08■□□□□ 0
SHOX-202ENST00000381575 ACACBO00763 2458 aa15.08■□□□□ 0
SHOX-202ENST00000381575 NUP205Q92621 2012 aa15.07■□□□□ 0
SHOX-202ENST00000381575 SOBPA7XYQ1 873 aa15.07■□□□□ 0
SHOX-202ENST00000381575 LEFTY2O00292 366 aa15.07■□□□□ 0
SHOX-202ENST00000381575 TAF10Q12962 218 aa15.07■□□□□ 0
SHOX-202ENST00000381575 PSMD2Q13200 908 aa15.07■□□□□ 0
SHOX-202ENST00000381575 NCOA4Q13772 614 aa15.07■□□□□ 0
SHOX-202ENST00000381575 CCDC6Q16204 474 aa15.07■□□□□ 0
SHOX-202ENST00000381575 WDR5BQ86VZ2 330 aa15.07■□□□□ 0
SHOX-202ENST00000381575 FAM160A2Q8N612 972 aaPredicted RBP15.07■□□□□ 0
SHOX-202ENST00000381575 RPLP0P6Q8NHW5 317 aa15.07■□□□□ 0
SHOX-202ENST00000381575 CD101Q93033 1021 aa15.07■□□□□ 0
SHOX-202ENST00000381575 SYAP1Q96A49 352 aaPredicted RBP15.07■□□□□ 0
SHOX-202ENST00000381575 SPATA32Q96LK8 384 aa15.07■□□□□ 0
SHOX-202ENST00000381575 C8orf48Q96LL4 319 aa15.07■□□□□ 0
SHOX-202ENST00000381575 MED10Q9BTT4 135 aa15.07■□□□□ 0
SHOX-202ENST00000381575 RNF38Q9H0F5 515 aa15.07■□□□□ 0
SHOX-202ENST00000381575 KCTD10Q9H3F6 313 aa15.07■□□□□ 0
SHOX-202ENST00000381575 CGNQ9P2M7 1197 aaKnown RBP15.07■□□□□ 0
SHOX-202ENST00000381575 HMGXB4Q9UGU5 601 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms