RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 RBM15Q96T37 977 aaKnown RBP eCLIP19.19■□□□□ 0.664e-6■■□□□ 13.6
RXRB-202ENST00000374685 SAYSD1Q9NPB0 183 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 KLC4Q9NSK0 619 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 ITGA11Q9UKX5 1188 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 GDF10P55107 478 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 CCDC142Q17RM4 750 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 ZNF618Q5T7W0 954 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 CST9Q5W186 159 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 ZC3H18Q86VM9 953 aaKnown RBP19.19■□□□□ 0.66
RXRB-202ENST00000374685 LHX5Q9H2C1 402 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 HOMER3Q9NSC5 361 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 GJD2Q9UKL4 321 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 TRIP12Q14669 1992 aaPredicted RBP19.18■□□□□ 0.66
RXRB-202ENST00000374685 KLHL33A6NCF5 533 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 RASSF9O75901 435 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 VDRP11473 427 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 SLC25A11Q02978 314 aaKnown RBP19.18■□□□□ 0.66
RXRB-202ENST00000374685 GAD2Q05329 585 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 MFSD10Q14728 455 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 SLC27A1Q6PCB7 646 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 NPNTQ6UXI9 565 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
RXRB-202ENST00000374685 ANKRD42Q8N9B4 389 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 RXFP2Q8WXD0 754 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 SLCO2A1Q92959 643 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 ADAMTS10Q9H324 1103 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 KCNK9Q9NPC2 374 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.18■□□□□ 0.66
RXRB-202ENST00000374685 NINJ2Q9NZG7 142 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 ATICP31939 592 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 POU5F1BQ06416 359 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 AUHQ13825 339 aaKnown RBP19.18■□□□□ 0.66
RXRB-202ENST00000374685 PMF1Q6P1K2 205 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 RHBDF2Q6PJF5 856 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 USP18Q9UMW8 372 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 COL1A2P08123 1366 aa19.18■□□□□ 0.66
RXRB-202ENST00000374685 A8MXQ7 604 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 CCDC130P13994 396 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 GRM5P41594 1212 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 TAP1Q03518 808 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 CNGA2Q16280 664 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 QPCTQ16769 361 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 TRNP1Q6NT89 227 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 IFNLR1Q8IU57 520 aaPredicted RBP19.17■□□□□ 0.66
RXRB-202ENST00000374685 ANKMY2Q8IV38 441 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 NMRK2Q9NPI5 230 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 C2CD2Q9Y426 696 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 GPR32O75388 356 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 TTC4O95801 387 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 CDH6P55285 790 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 C6orf118Q5T5N4 469 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 NAIF1Q69YI7 327 aaPredicted RBP19.17■□□□□ 0.66
RXRB-202ENST00000374685 NOTUMQ6P988 496 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 TLCD1Q96CP7 247 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 NME7Q9Y5B8 376 aa19.17■□□□□ 0.66
RXRB-202ENST00000374685 PECAM1P16284 738 aaPredicted RBP19.16■□□□□ 0.66
RXRB-202ENST00000374685 KDELR1P24390 212 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 KLRC2P26717 231 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 BIRC2Q13490 618 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 RNF187Q5TA31 235 aaPredicted RBP19.16■□□□□ 0.66
RXRB-202ENST00000374685 C1orf228Q6PIY5 440 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 MICALCLQ6ZW33 695 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 ZNF410Q86VK4 478 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 CLEC4CQ8WTT0 213 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 PEBP4Q96S96 227 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 CYP3A43Q9HB55 503 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 SLC5A4Q9NY91 659 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 NEU2Q9Y3R4 380 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 ATP2C2O75185 946 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 CTSHP09668 335 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 LMO2P25791 158 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 VCPP55072 806 aaKnown RBP19.16■□□□□ 0.66
RXRB-202ENST00000374685 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 TRMT10CQ7L0Y3 403 aaKnown RBP19.16■□□□□ 0.66
RXRB-202ENST00000374685 TTC30AQ86WT1 665 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 DDX56Q9NY93 547 aaKnown RBP19.16■□□□□ 0.66
RXRB-202ENST00000374685 SLC45A1Q9Y2W3 748 aa19.16■□□□□ 0.66
RXRB-202ENST00000374685 GMNCA6NCL1 334 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 SLC15A5A6NIM6 579 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 POC1B-GALNT4F8VUJ3 575 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 KRT7P08729 469 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 PPP6R3Q5H9R7 873 aaPredicted RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 SYDE1Q6ZW31 735 aaPredicted RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 CPLX4Q7Z7G2 160 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 FAM71DQ8N9W8 422 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 MAGEC3Q8TD91 643 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 RSAD2Q8WXG1 361 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 ARHGEF2Q92974 986 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 PRMT1Q99873 361 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 VPS37BQ9H9H4 285 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 HMGCRP04035 888 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 C6orf222P0C671 652 aaPredicted RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 LCP1P13796 627 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 INHBEP58166 350 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 SARNPP82979 210 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 ACTN3Q08043 901 aaPredicted RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 ZBED8Q8IZ13 594 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 ALLCQ8N6M5 410 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 DYDC1Q8WWB3 177 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms