RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 USP2O75604 605 aaPredicted RBP18.77■□□□□ 0.6
PHF1-201ENST00000374512 FAM155BO75949 473 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 MT-ND3P03897 115 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 GDF10P55107 478 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 ZNF699Q32M78 642 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 CYP4A22Q5TCH4 519 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 TCHPQ9BT92 498 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 NKX1-2Q9UD57 310 aaPredicted RBP18.77■□□□□ 0.6
PHF1-201ENST00000374512 XPO7Q9UIA9 1087 aaKnown RBP18.77■□□□□ 0.6
PHF1-201ENST00000374512 IKBKGQ9Y6K9 419 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 PTPRFP10586 1907 aa18.77■□□□□ 0.6
PHF1-201ENST00000374512 ABLIM1O14639 778 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 MCF2LO15068 1137 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 CBX6O95503 412 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 EPHB2P29323 1055 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 ASPAP45381 313 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 SLC18A2Q05940 514 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 EXOC8Q8IYI6 725 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 TSSK1BQ9BXA7 367 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 ZWILCHQ9H900 591 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 RSAD1Q9HA92 442 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 CPSF3Q9UKF6 684 aaKnown RBP18.77■□□□□ 0.59
PHF1-201ENST00000374512 POLIQ9UNA4 740 aa18.77■□□□□ 0.59
PHF1-201ENST00000374512 GAS2O43903 313 aaKnown RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 BANF1O75531 89 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 SMNDC1O75940 238 aaKnown RBP eCLIP18.76■□□□□ 0.59
PHF1-201ENST00000374512 GCKP35557 465 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 TNFSF9P41273 254 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 DYNLT1P63172 113 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 PRKG1Q13976 671 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 PTPN20Q4JDL3 420 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 ZNF394Q53GI3 561 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 PLEKHG4Q58EX7 1191 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 IER5Q5VY09 327 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 CDCA2Q69YH5 1023 aaPredicted RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 LBX2Q6XYB7 198 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 ARFGAP1Q8N6T3 406 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 APBB2Q92870 758 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 ACO2Q99798 780 aaKnown RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 WDR83Q9BRX9 315 aaKnown RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 BTBD10Q9BSF8 475 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 KLF11O14901 512 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 LPXNO60711 386 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 TNNC2P02585 160 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 EDNRBP24530 442 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 IL1R2P27930 398 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 RAD23BP54727 409 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 EIF3EP60228 445 aaKnown RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 PSMC1P62191 440 aaKnown RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 DPYSL3Q14195 570 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 KRT72Q14CN4 511 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 EFTUD2Q15029 972 aaKnown RBP eCLIP18.76■□□□□ 0.591e-11■■■■□ 22.4
PHF1-201ENST00000374512 BBS9Q3SYG4 887 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 DENND1BQ6P3S1 775 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 KCTD6Q8NC69 237 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 SLC44A1Q8WWI5 657 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 PRPF31Q8WWY3 499 aaKnown RBP18.76■□□□□ 0.59
PHF1-201ENST00000374512 SEPT1Q8WYJ6 367 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 APOPT1Q96IL0 206 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 XYLT2Q9H1B5 865 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 PNPLA8Q9NP80 782 aa18.76■□□□□ 0.59
PHF1-201ENST00000374512 B4GALT4O60513 344 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 RNF8O76064 485 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 TMEM63AO94886 807 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 HAUS5O94927 633 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 GM2AP17900 193 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 TCF7P36402 384 aaPredicted RBP18.75■□□□□ 0.59
PHF1-201ENST00000374512 ETV4P43268 484 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 NEK3P51956 506 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 ARFIP2P53365 341 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 ZNF200P98182 395 aaPredicted RBP18.75■□□□□ 0.59
PHF1-201ENST00000374512 MXD4Q14582 209 aaPredicted RBP18.75■□□□□ 0.59
PHF1-201ENST00000374512 FAM91A1Q658Y4 838 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 ZBTB33Q86T24 672 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 NSL1Q96IY1 281 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 FAM167AQ96KS9 214 aa18.75■□□□□ 0.59
PHF1-201ENST00000374512 MMADHCQ9H3L0 296 aaPredicted RBP18.75■□□□□ 0.59
PHF1-201ENST00000374512 DENND2DQ9H6A0 471 aaPredicted RBP18.75■□□□□ 0.59
PHF1-201ENST00000374512 SAE1Q9UBE0 346 aaPredicted RBP18.75■□□□□ 0.59
PHF1-201ENST00000374512 TTLL13PA6NNM8 815 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 TGFB3P10600 412 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 ATP6V1C1P21283 382 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 PCK1P35558 622 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 GAD2Q05329 585 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 TSNAXIP1Q2TAA8 658 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 C4orf50Q6ZRC1 276 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 RFX6Q8HWS3 928 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 RIOX2Q8IUF8 465 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 APLFQ8IW19 511 aaPredicted RBP18.74■□□□□ 0.59
PHF1-201ENST00000374512 ZBTB8OSQ8IWT0 167 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 UNC45BQ8IWX7 931 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 JOSD2Q8TAC2 188 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 PTCD3Q96EY7 689 aaKnown RBP18.74■□□□□ 0.59
PHF1-201ENST00000374512 ANKRD36BP1Q96IX9 119 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 C2orf40Q9H1Z8 148 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 KANSL3Q9P2N6 904 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 STOML1Q9UBI4 398 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 INHBAP08476 426 aa18.74■□□□□ 0.59
PHF1-201ENST00000374512 RBP3P10745 1247 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms