RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ZNF449Q6P9G9 518 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 MTDHQ86UE4 582 aaKnown RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 PDIK1LQ8N165 341 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 ENDOVQ8N8Q3 282 aaKnown RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 FAM71DQ8N9W8 422 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 RFWD2Q8NHY2 731 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 ANKRD27Q96NW4 1050 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 ZFP69BQ9UJL9 534 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 ENDOD1O94919 500 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 PTPN4P29074 926 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 EPHB2P29323 1055 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 MIPP30301 263 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 MANSC1Q9H8J5 431 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 SIX4Q9UIU6 781 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 E7ENQ6 273 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 TRUB2O95900 331 aaKnown RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 TPBGLP0DKB5 382 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 NEK3P51956 506 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 NRLP54845 237 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 EIF3EP60228 445 aaKnown RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 MXD4Q14582 209 aaPredicted RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 ACAP1Q15027 740 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 MPZL3Q6UWV2 235 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 KCTD6Q8NC69 237 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 KLF6Q99612 283 aaPredicted RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 RPL26L1Q9UNX3 145 aaKnown RBP13.34□□□□□ -0.27
CTPS1-202ENST00000372621 TEX264Q9Y6I9 313 aa13.34□□□□□ -0.27
CTPS1-202ENST00000372621 PTPRFP10586 1907 aa13.33□□□□□ -0.27
CTPS1-202ENST00000372621 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.28
CTPS1-202ENST00000372621 WDR91A4D1P6 747 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 GOLGA8RI6L899 631 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 CD19P15391 556 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 SLC18A2Q05940 514 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 MTM1Q13496 603 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 KCNJ11Q14654 390 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 WASHC2DQ5SRD0 308 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 CHSY1Q86X52 802 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 RFX6Q8HWS3 928 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 SLC4A11Q8NBS3 891 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 SEPT1Q8WYJ6 367 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 KLRG1Q96E93 195 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 CYTH2Q99418 400 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 KCNK13Q9HB14 408 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
CTPS1-202ENST00000372621 PCSK1NQ9UHG2 260 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 TCRBV9S1A1TA0A576 114 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 SOWAHBA6NEL2 793 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 NFKBIEO00221 500 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 HNRNPCL1O60812 293 aaKnown RBP13.33□□□□□ -0.28
CTPS1-202ENST00000372621 TNNC2P02585 160 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 C1QAP02745 245 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 TROVE2P10155 538 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTPS1-202ENST00000372621 RBP3P10745 1247 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 TAB3Q8N5C8 712 aaPredicted RBP13.33□□□□□ -0.28
CTPS1-202ENST00000372621 CEP120Q8N960 986 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 CXorf38Q8TB03 319 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 SLC44A1Q8WWI5 657 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 FAXDC2Q96IV6 333 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 ANKRD36BP1Q96IX9 119 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 SERAC1Q96JX3 654 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 TWNKQ96RR1 684 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 PEBP4Q96S96 227 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 MIPEPQ99797 713 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 FZD8Q9H461 694 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 PIM2Q9P1W9 311 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 USP18Q9UMW8 372 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 CHMP2BQ9UQN3 213 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 LRRC42Q9Y546 428 aa13.33□□□□□ -0.28
CTPS1-202ENST00000372621 GAS2O43903 313 aaKnown RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 PEX10O60683 326 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 ELK3P41970 407 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 CDH8P55286 799 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 OVGP1Q12889 678 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 FAM167AQ96KS9 214 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 RSAD1Q9HA92 442 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 CNTN3Q9P232 1028 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 ACKR2O00590 384 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 MCF2LO15068 1137 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 TGDSO95455 350 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 TGFB3P10600 412 aa13.32□□□□□ -0.28
CTPS1-202ENST00000372621 STIP1P31948 543 aaKnown RBP13.32□□□□□ -0.28
CTPS1-202ENST00000372621 PCK1P35558 622 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms