RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ZNF576Q9H609 170 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 TMEM30AQ9NV96 361 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 REXO2Q9Y3B8 237 aaKnown RBP16.73■□□□□ 0.27
TMEM53-204ENST00000372243 PCDHA13Q9Y5I0 950 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 COL4A4P53420 1690 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-204ENST00000372243 MYH10P35580 1976 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 ANKRD62A6NC57 917 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 EPOPA6NHQ4 379 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 TMCO5BA8MYB1 307 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 CCDC175P0C221 793 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 MAGEA1P43355 309 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 ACADSBP45954 432 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 GABRB2P47870 512 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 CACNA2D1P54289 1103 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
TMEM53-204ENST00000372243 DUSP4Q13115 394 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 PTPROQ16827 1216 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 MON1BQ7L1V2 547 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 TMEM110Q86TL2 294 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 PIGZQ86VD9 579 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 TCEAL8Q8IYN2 117 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 MCOLN2Q8IZK6 566 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 ACRBPQ8NEB7 543 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 GDPD5Q8WTR4 605 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 KCNK16Q96T55 309 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 RHOBTB2Q9BYZ6 727 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 PATJQ8NI35 1801 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 HHLA1C9JL84 531 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 TULP2O00295 520 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 CALB1P05937 261 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 H2AFZP0C0S5 128 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 MYBL1P10243 752 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 KLRC2P26717 231 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 GRIK1P39086 918 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 VAV2P52735 878 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 GSCP56915 257 aaPredicted RBP16.72■□□□□ 0.27
TMEM53-204ENST00000372243 RPL10AP62906 217 aaKnown RBP16.72■□□□□ 0.27
TMEM53-204ENST00000372243 PTP4A2Q12974 167 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 PTPN20Q4JDL3 420 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 RAB41Q5JT25 222 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 H2AFVQ71UI9 128 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 RTL10Q7L3V2 364 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 IPO4Q8TEX9 1081 aaKnown RBP16.72■□□□□ 0.27
TMEM53-204ENST00000372243 SPATA17Q96L03 361 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 CPXM1Q96SM3 734 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 DESI2Q9BSY9 194 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 CRISPLD1Q9H336 500 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 ADAM22Q9P0K1 906 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 STRIP2Q9ULQ0 834 aa16.72■□□□□ 0.27
TMEM53-204ENST00000372243 ATG2AQ2TAZ0 1938 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 F8VP50 259 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 TGM5O43548 720 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 TMEM253P0C7T8 217 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 ELF1P32519 619 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 CLCN4P51793 760 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 GALCP54803 685 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 ZNF662Q6ZS27 426 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 ZDHHC17Q8IUH5 632 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 TTC9BQ8N6N2 239 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 C18orf8Q96DM3 657 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 MRPL38Q96DV4 380 aaKnown RBP16.71■□□□□ 0.27
TMEM53-204ENST00000372243 WDR35Q9P2L0 1181 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 FBXW11Q9UKB1 542 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 PYCARDQ9ULZ3 195 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 SLC27A5Q9Y2P5 690 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 PCDHGC5Q9Y5F6 944 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 TRANK1O15050 2925 aa16.71■□□□□ 0.27
TMEM53-204ENST00000372243 PJA2O43164 708 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 SEC24AO95486 1093 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 GLUD1P00367 558 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 CDR1P51861 262 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 SCN4BQ8IWT1 228 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 SCML4Q8N228 414 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 HDAC7Q8WUI4 952 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 CTNNBL1Q8WYA6 563 aaPredicted RBP16.7■□□□□ 0.26
TMEM53-204ENST00000372243 SEPT5Q99719 369 aaPredicted RBP16.7■□□□□ 0.26
TMEM53-204ENST00000372243 C11orf70Q9BRQ4 267 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 CYP4F11Q9HBI6 524 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 LRRC4Q9HBW1 653 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 AVENQ9NQS1 362 aaPredicted RBP16.7■□□□□ 0.26
TMEM53-204ENST00000372243 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 KCND1Q9NSA2 647 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 ZKSCAN5Q9Y2L8 839 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 PLXNA3P51805 1871 aa16.7■□□□□ 0.26
TMEM53-204ENST00000372243 E5RJQ4 531 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 TNFRSF10BO14763 440 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 ZSCAN12O43309 604 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 CLASP2O75122 1294 aaKnown RBP16.69■□□□□ 0.26
TMEM53-204ENST00000372243 GABBR2O75899 941 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 RGS7P49802 495 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 GPC5P78333 572 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 ZNF268Q14587 947 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-204ENST00000372243 DDR2Q16832 855 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 LIN9Q5TKA1 542 aa16.69■□□□□ 0.26
TMEM53-204ENST00000372243 CCDC149Q6ZUS6 474 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms