RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MROH1Q8NDA8 1641 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 BAZ2BQ9UIF8 2168 aaKnown RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 VSNL1P62760 191 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 PSMC3IPQ9P2W1 217 aaPredicted RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 ANGPTL2Q9UKU9 493 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 AP4E1Q9UPM8 1137 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 TMEM88BA6NKF7 163 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 LACTBL1A8MY62 500 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 ZBTB39O15060 712 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 SLURP2P0DP57 97 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 TIGD7Q6NT04 549 aaPredicted RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 BRSK2Q8IWQ3 736 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 PPIL6Q8IXY8 311 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 EMC1Q8N766 993 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 RXFP2Q8WXD0 754 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 FRMD8Q9BZ67 464 aaPredicted RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 VPS9D1Q9Y2B5 631 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 FAM47DPA6NHR8 397 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 F8VZ95 297 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 SYNCRIPO60506 623 aaKnown RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 CKBP12277 381 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 FDFT1P37268 417 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 MAGEA4P43358 317 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 NUMBP49757 651 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 FAXCQ5TGI0 409 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 TATDN2Q93075 761 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 CDK5RAP1Q96SZ6 601 aaKnown RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 APOL5Q9BWW9 433 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 UBXN6Q9BZV1 441 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 HEATR9A2RTY3 570 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 GMNCA6NCL1 334 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 RHOBTB1O94844 696 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 ITGA8P53708 1063 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 SLC47A2Q86VL8 602 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 TRIM48Q8IWZ4 208 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 USP38Q8NB14 1042 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 RUBCNQ92622 972 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 STAMBPL1Q96FJ0 436 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 TSPAN16Q9UKR8 245 aa15.31■□□□□ 0.04
NDC1-201ENST00000371429 SMG5Q9UPR3 1016 aaKnown RBP15.31■□□□□ 0.04
NDC1-201ENST00000371429 RHOAP61586 193 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 KYNUQ16719 465 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 UNC45BQ8IWX7 931 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 PCMTD2Q9NV79 361 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 XYLBO75191 536 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 AARSP49588 968 aaKnown RBP eCLIP15.3■□□□□ 0.04
NDC1-201ENST00000371429 TMEM119Q4V9L6 283 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 EDEM1Q92611 657 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 ERP44Q9BS26 406 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 SMPD4Q9NXE4 827 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 ADAM21Q9UKJ8 722 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 SUPT3HB4E1H0 165 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 CBX4O00257 560 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 SUPT3HO75486 399 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 RECQL4O94761 1208 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 PYGBP11216 843 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 COILP38432 576 aaPredicted RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 HSPA9P38646 679 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 PTK7Q13308 1070 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 PLD1Q13393 1074 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 SPATA16Q9BXB7 569 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 CELF4Q9BZC1 486 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 ITM2BQ9Y287 266 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 SMIM22K7EJ46 135 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 RAD51CO43502 376 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 KRT4P19013 534 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 IGFBP4P22692 258 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 CSE1LP55060 971 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 E2F5Q15329 346 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 MAPRE2Q15555 327 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 LONRF1Q17RB8 773 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 TTLL9Q3SXZ7 439 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 FIGNQ5HY92 759 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 OOSP2Q86WS3 158 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 KIRREL3Q8IZU9 778 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 MRPL46Q9H2W6 279 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 TFR2Q9UP52 801 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 TRAF3IP3Q9Y228 551 aa15.3■□□□□ 0.04
NDC1-201ENST00000371429 AAR2Q9Y312 384 aaKnown RBP15.3■□□□□ 0.04
NDC1-201ENST00000371429 UMODL1Q5DID0 1318 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 ATP5HO75947 161 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 SNRPAP09012 282 aaKnown RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 CCR1P32246 355 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 TUFMP49411 452 aaKnown RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 SNX31Q8N9S9 440 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 KIAA0895Q8NCT3 520 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 WWP1Q9H0M0 922 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 PORCNQ9H237 461 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 TSPYL2Q9H2G4 693 aaPredicted RBP15.29■□□□□ 0.04
NDC1-201ENST00000371429 PPCSQ9HAB8 311 aa15.29■□□□□ 0.04
NDC1-201ENST00000371429 CCDC22O60826 627 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms