RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 EHMT1Q9H9B1 1298 aa17.65■□□□□ 0.42
DKC1-201ENST00000369550 ZDHHC7Q9NXF8 308 aa17.65■□□□□ 0.42
DKC1-201ENST00000369550 XPO7Q9UIA9 1087 aaKnown RBP17.65■□□□□ 0.42
DKC1-201ENST00000369550 SOX13Q9UN79 622 aa17.65■□□□□ 0.42
DKC1-201ENST00000369550 AGTPBP1Q9UPW5 1226 aa17.65■□□□□ 0.42
DKC1-201ENST00000369550 ANKRD31Q8N7Z5 1873 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 hCG_1818297A0A087WSY0 165 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 TMEM150BA6NC51 233 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 KLF11O14901 512 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 STIP1P31948 543 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 RGS2P41220 211 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 GDF10P55107 478 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 PSMC5P62195 406 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 PDK3Q15120 406 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 KBTBD12Q3ZCT8 623 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 ATG16L1Q676U5 607 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 HIPK4Q8NE63 616 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 GDPD5Q8WTR4 605 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 DNAJC1Q96KC8 554 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 CNTN3Q9P232 1028 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 TBX20Q9UMR3 447 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 FOCADQ5VW36 1801 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 ZSCAN9O15535 394 aaPredicted RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 P4HBP07237 508 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 PEX2P28328 305 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 SERPINB6P35237 376 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 EPHB1P54762 984 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 YWHAGP61981 247 aaKnown RBP eCLIP17.64■□□□□ 0.41
DKC1-201ENST00000369550 NOMO3P69849 1222 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 BASP1P80723 227 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 PDE1BQ01064 536 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 TTLL12Q14166 644 aaPredicted RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 HSF5Q4G112 596 aaPredicted RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 LMBRD2Q68DH5 695 aaPredicted RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 KYAT3Q6YP21 454 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 NCAPG2Q86XI2 1143 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 RBM12BQ8IXT5 1001 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 CERS5Q8N5B7 392 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 NAT8LQ8N9F0 302 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 E2F7Q96AV8 911 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 CCDC124Q96CT7 223 aaKnown RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 C7orf26Q96N11 449 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 ZNF395Q9H8N7 513 aaPredicted RBP17.64■□□□□ 0.41
DKC1-201ENST00000369550 NDUFA13Q9P0J0 144 aa17.64■□□□□ 0.41
DKC1-201ENST00000369550 TCRBV7S3A2A0A539 114 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 F8VP50 259 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 STK10O94804 968 aaKnown RBP17.63■□□□□ 0.41
DKC1-201ENST00000369550 SETSIPP0DME0 302 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 GNA15P30679 374 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CHN2P52757 468 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 SLC25A3Q00325 362 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 SLC18A2Q05940 514 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CYP24A1Q07973 514 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 GRM2Q14416 872 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TRIP10Q15642 601 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CHI3L2Q15782 390 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TBCCQ15814 346 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
DKC1-201ENST00000369550 ACBD5Q5T8D3 534 aaPredicted RBP17.63■□□□□ 0.41
DKC1-201ENST00000369550 MAP3K21Q5TCX8 1036 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TMEM270Q6UE05 265 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 ADGRG6Q86SQ4 1221 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CRLF3Q8IUI8 442 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TRIM42Q8IWZ5 723 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 NLGN1Q8N2Q7 840 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 GMCL1P1Q8NEA9 526 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 SHKBP1Q8TBC3 707 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TMC2Q8TDI7 906 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 DGCR14Q96DF8 476 aaKnown RBP17.63■□□□□ 0.41
DKC1-201ENST00000369550 NRXN2Q9P2S2 1712 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 A0A088AWK7 358 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TCRBV9S1A1TA0A576 114 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 DESP17661 470 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 GTF2H1P32780 548 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TXNRD3NBQ6F5E7 133 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 DCUN1D2Q6PH85 259 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CDHR3Q6ZTQ4 885 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TMEM179Q6ZVK1 233 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CTAGE3PQ8IX95 158 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 MCEEQ96PE7 176 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 CCDC106Q9BWC9 280 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 ADAMTS6Q9UKP5 1117 aa17.63■□□□□ 0.41
DKC1-201ENST00000369550 TMEM63AO94886 807 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 MSLNQ13421 630 aaPredicted RBP17.62■□□□□ 0.41
DKC1-201ENST00000369550 TRIM72Q6ZMU5 477 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 ABRAQ8N0Z2 381 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 ZNF526Q8TF50 670 aaPredicted RBP17.62■□□□□ 0.41
DKC1-201ENST00000369550 SLC44A1Q8WWI5 657 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 VCPIP1Q96JH7 1222 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 SLC13A1Q9BZW2 595 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 C1orf21Q9H246 121 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 PTTG2Q9NZH5 202 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 PCDHB4Q9Y5E5 795 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 ZC3H11AO75152 810 aaKnown RBP eCLIP17.62■□□□□ 0.416e-12■■□□□ 11.4
DKC1-201ENST00000369550 ELK3P41970 407 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 OTUD4Q01804 1114 aaKnown RBP17.62■□□□□ 0.41
DKC1-201ENST00000369550 NCOA4Q13772 614 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 ABCB5Q2M3G0 1257 aa17.62■□□□□ 0.41
DKC1-201ENST00000369550 GRAMD1BQ3KR37 738 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms