RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 EPC1Q9H2F5 836 aa7.34□□□□□ -1.23
SPTA1-201ENST00000368147 ZNF556Q9HAH1 456 aa7.34□□□□□ -1.23
SPTA1-201ENST00000368147 MANSC4A6NHS7 340 aaPredicted RBP7.34□□□□□ -1.24
SPTA1-201ENST00000368147 IL18RAPO95256 599 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 EYA4O95677 639 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 MLNP12872 115 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 GYS1P13807 737 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 KLK7P49862 253 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 RAB2AP61019 212 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 TFAP2DQ7Z6R9 452 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 SRLQ86TD4 932 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 MTERF3Q96E29 417 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 MYOCQ99972 504 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 MCM8Q9UJA3 840 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 SNX8Q9Y5X2 465 aa7.34□□□□□ -1.24
SPTA1-201ENST00000368147 PGK1P00558 417 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ACO1P21399 889 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 KLRC1P26715 233 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TAF6P49848 677 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 EFR3AQ14156 821 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SGSM1Q2NKQ1 1148 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 DAB2IPQ5VWQ8 1189 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 NT5DC3Q86UY8 548 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 HERC6Q8IVU3 1022 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SERAC1Q96JX3 654 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 AP1S3Q96PC3 154 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 AGPAT1Q99943 283 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 HDAC6Q9UBN7 1215 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ZC3H7BQ9UGR2 993 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 NINQ8N4C6 2090 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 UNC13BO14795 1591 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 MDM2Q00987 491 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 RBBP8NLQ8NC74 664 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 PSMA8Q8TAA3 256 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 FAM129BQ96TA1 746 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 PACSIN1Q9BY11 444 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 COPS7BQ9H9Q2 264 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TRIM39Q9HCM9 518 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 RAB6BQ9NRW1 208 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ARHGEF40Q8TER5 1519 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TULP4Q9NRJ4 1543 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 NCAPD2Q15021 1401 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 USP42Q9H9J4 1324 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TRDMT1O14717 391 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 BRAFP15056 766 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 HPGDP15428 266 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 MFSD10Q14728 455 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CNGA3Q16281 694 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ARMCX4Q5H9R4 360 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CENPPQ6IPU0 288 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 INTS5Q6P9B9 1019 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TMA16Q96EY4 203 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SNF8Q96H20 258 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ELAC2Q9BQ52 826 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CHUKO15111 745 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CYTH3O43739 400 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 STAU1O95793 577 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ENO2P09104 434 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CCDC166P0CW27 439 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CCDC130P13994 396 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 VCLP18206 1134 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CAP2P40123 477 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TRAP1Q12931 704 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 NNTQ13423 1086 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CAMK2GQ13555 558 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 USP10Q14694 798 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ARID5BQ14865 1188 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TRAPPC12Q8WVT3 735 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 CORO1BQ9BR76 489 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 RSPH9Q9H1X1 276 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 DDIT4Q9NX09 232 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 LIMA1Q9UHB6 759 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 NCKAP1Q9Y2A7 1128 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 USP20Q9Y2K6 914 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 LRRIQ3A6PVS8 624 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SNPHO15079 494 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 KRT37O76014 449 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ALDH9A1P49189 494 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 NME5P56597 212 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 ZBED6P86452 979 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 GET4Q7L5D6 327 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 EDEM1Q92611 657 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 MTFMTQ96DP5 389 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 DEFB118Q96PH6 123 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 MNTQ99583 582 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 UNKQ9C0B0 810 aaKnown RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TASP1Q9H6P5 420 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 C1orf167Q5SNV9 1468 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TRPM1Q7Z4N2 1603 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SH3BGRLO75368 114 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 DGAT1O75907 488 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 DGKIO75912 1065 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 TMEM199Q8N511 208 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SPRTNQ9H040 489 aaPredicted RBP7.33□□□□□ -1.24
SPTA1-201ENST00000368147 RHBGQ9H310 441 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 SOHLH2Q9NX45 425 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 USE1Q9NZ43 259 aa7.33□□□□□ -1.24
SPTA1-201ENST00000368147 RRP15Q9Y3B9 282 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms