RNA–Protein interactions for RNA: ENST00000362576.1

RNU6-543P-201, Transcript of RNA, U6 small nuclear 543, pseudogene, humanhuman

BASIC

Gene RNU6-543P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-543P-201ENST00000362576 KCNA3P22001 575 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 FGFR4P22455 802 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 APOBEC3AP31941 199 aaPredicted RBP5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 CNR2P34972 360 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 ADD2P35612 726 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 TOB1P50616 345 aaPredicted RBP5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 SCAPQ12770 1279 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 TRIM71Q2Q1W2 868 aaKnown RBP5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 P3H1Q32P28 736 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 PTCHD3Q3KNS1 767 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 ZIK1Q3SY52 487 aaPredicted RBP5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 MANEALQ5VSG8 457 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 AGAP9Q5VTM2 703 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 LIN54Q6MZP7 749 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 TCTN3Q6NUS6 607 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 POLNQ7Z5Q5 900 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 FUKQ8N0W3 1084 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 IL17REQ8NFR9 667 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 CPT1CQ8TCG5 803 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 WDR60Q8WVS4 1066 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 GOLGA1Q92805 767 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 C3orf49Q96BT1 292 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 ZNF668Q96K58 619 aaPredicted RBP5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 HIST1H2AAQ96QV6 131 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 DCLRE1CQ96SD1 692 aaKnown RBP5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 MNTQ99583 582 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 SMC4Q9NTJ3 1288 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 HSFX1Q9UBD0 423 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 USP22Q9UPT9 525 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 DTNAQ9Y4J8 743 aa5.38□□□□□ -1.55
RNU6-543P-201ENST00000362576 PNMA6EA0A0J9YXQ4 647 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 J3KTA2 159 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CYP27B1O15528 508 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 TRIAP1O43715 76 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 KRT38O76015 456 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 RECQL4O94761 1208 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SUN1O94901 812 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 NTSR2O95665 410 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 HGFP14210 728 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 RXRAP19793 462 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 MST1P26927 711 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CST5P28325 142 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CD6P30203 668 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 KRT9P35527 623 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 NDUFV1P49821 464 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 MTHFSP49914 203 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 ANXA11P50995 505 aaKnown RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 PGDP52209 483 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CRHR2Q13324 411 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CUL4BQ13620 913 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SLC12A1Q13621 1099 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SPDYE7PQ495Y7 208 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CD300EQ496F6 205 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 FAM102AQ5T9C2 384 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 INTS11Q5TA45 600 aaKnown RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SFRP4Q6FHJ7 346 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 RGS7BPQ6MZT1 257 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 GLB1LQ6UWU2 654 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CLEC4GQ6UXB4 293 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SPOCD1Q6ZMY3 1216 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 RRAGAQ7L523 313 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CIR1Q86X95 450 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SLC44A2Q8IWA5 706 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 ESX1Q8N693 406 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SPPL3Q8TCT6 385 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 ZNF483Q8TF39 744 aaPredicted RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 TMEM171Q8WVE6 324 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 ATRIPQ8WXE1 791 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SNX19Q92543 992 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 RILPL2Q969X0 211 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 LRIG1Q96JA1 1093 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 MAELQ96JY0 434 aaKnown RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 FAM227BQ96M60 508 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 NELL2Q99435 816 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 MEGF9Q9H1U4 602 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 PABPC3Q9H361 631 aaKnown RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 ELAC1Q9H777 363 aaKnown RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 CXorf36Q9H7Y0 433 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 TRPM5Q9NZQ8 1165 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 SWAP70Q9UH65 585 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 NDRG4Q9ULP0 352 aaKnown RBP5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 NOX1Q9Y5S8 564 aa5.37□□□□□ -1.55
RNU6-543P-201ENST00000362576 A0A1B0GVC2 190 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 B9A039 149 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 E7ENX8 843 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 SCAF4O95104 1147 aaKnown RBP5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 MBD4O95243 580 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 LMNAP02545 664 aaKnown RBP5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 ANXA6P08133 673 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 CKMT1AP12532 417 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 MAN1A1P33908 653 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 CASP2P42575 452 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 NPTX2P47972 431 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 MAN2A2P49641 1150 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 GATMP50440 423 aa5.36□□□□□ -1.55
RNU6-543P-201ENST00000362576 RPS7P62081 194 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms