RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 DPH6Q7L8W6 267 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 LIMS2Q7Z4I7 341 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 OR5B17Q8NGF7 314 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 CCDC26Q8TAB7 109 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 HPDLQ96IR7 371 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 SPATA17Q96L03 361 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 PANK2Q9BZ23 570 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 CRTAC1Q9NQ79 661 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 PANK4Q9NVE7 773 aa22.58■■□□□ 1.21
CD47-202ENST00000361309 CEP192Q8TEP8 1941 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 ASCC3Q8N3C0 2202 aaKnown RBP22.57■■□□□ 1.2
CD47-202ENST00000361309 PDGFRBP09619 1106 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 GRIK1P39086 918 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 PDE6CP51160 858 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 USP46P62068 366 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 GAB4Q2WGN9 574 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 PMS2CLQ68D20 193 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 VSTM1Q6UX27 236 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 CCDC73Q6ZRK6 1079 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 TRPM5Q9NZQ8 1165 aa22.57■■□□□ 1.2
CD47-202ENST00000361309 TNRC6BQ9UPQ9 1833 aaKnown RBP22.57■■□□□ 1.2
CD47-202ENST00000361309 LEFTY2O00292 366 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 TNNC2P02585 160 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 STAT6P42226 847 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 CYP27A1Q02318 531 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 CEBPZQ03701 1054 aaKnown RBP22.56■■□□□ 1.2
CD47-202ENST00000361309 MAPRE1Q15691 268 aaKnown RBP22.56■■□□□ 1.2
CD47-202ENST00000361309 ANO7Q6IWH7 933 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 FAM173BQ6P4H8 233 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 DENND5BQ6ZUT9 1274 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 RASSF3Q86WH2 238 aa22.56■■□□□ 1.2
CD47-202ENST00000361309 A0A087X0B3 334 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 LNP1A1A4G5 178 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 GIPC1O14908 333 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 PFKLP17858 780 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 BCKDHBP21953 392 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 ANXA13P27216 316 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 NOVA1P51513 510 aaKnown RBP22.55■■□□□ 1.2
CD47-202ENST00000361309 DUOXA2Q1HG44 320 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 C11orf74Q86VG3 221 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 CCDC33Q8N5R6 958 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 CEP295NLQ96MC4 621 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 RNF38Q9H0F5 515 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 MMP17Q9ULZ9 603 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 PLXND1Q9Y4D7 1925 aa22.55■■□□□ 1.2
CD47-202ENST00000361309 ZNF233A6NK53 670 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 KIAA0391O15091 583 aaKnown RBP22.54■■□□□ 1.2
CD47-202ENST00000361309 CYP17A1P05093 508 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 WARSP23381 471 aaKnown RBP22.54■■□□□ 1.2
CD47-202ENST00000361309 DAB2IPQ5VWQ8 1189 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 FILIP1Q7Z7B0 1213 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 TTC30AQ86WT1 665 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 CBWD2Q8IUF1 395 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 GLIS3Q8NEA6 775 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 MDGA1Q8NFP4 955 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 PCED1BQ96HM7 432 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 CNOT6LQ96LI5 555 aaKnown RBP22.54■■□□□ 1.2
CD47-202ENST00000361309 MMS19Q96T76 1030 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 TTLL2Q9BWV7 592 aa22.54■■□□□ 1.2
CD47-202ENST00000361309 MYH10P35580 1976 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 ZNF840PA6NDX5 716 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 TRIM66O15016 1216 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 KHNYNO15037 678 aaKnown RBP22.53■■□□□ 1.2
CD47-202ENST00000361309 SLC7A9P82251 487 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 RESTQ13127 1097 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 SURF1Q15526 300 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 CRY1Q16526 586 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 CYP2U1Q7Z449 544 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 SFTPA1Q8IWL2 248 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 CCDC65Q8IXS2 484 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 ADGRG2Q8IZP9 1017 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 MYCBPAPQ8TBZ2 947 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 UPF2Q9HAU5 1272 aaKnown RBP22.53■■□□□ 1.2
CD47-202ENST00000361309 SMPD4Q9NXE4 827 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 EHD2Q9NZN4 543 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 CPQQ9Y646 472 aa22.53■■□□□ 1.2
CD47-202ENST00000361309 CACNA1GO43497 2377 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 PATE3B3GLJ2 98 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 F8VP50 259 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 SCAMP3O14828 347 aaKnown RBP22.52■■□□□ 1.2
CD47-202ENST00000361309 ABL1P00519 1130 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 PDCP20941 246 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 SLC6A11P48066 632 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 DHPSP49366 369 aaPredicted RBP22.52■■□□□ 1.2
CD47-202ENST00000361309 NOP14P78316 857 aaKnown RBP22.52■■□□□ 1.2
CD47-202ENST00000361309 MRPS21P82921 87 aaKnown RBP22.52■■□□□ 1.2
CD47-202ENST00000361309 DHCR24Q15392 516 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 MDH1BQ5I0G3 518 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 SH3PXD2AQ5TCZ1 1133 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 TMEM92Q6UXU6 159 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 HPS3Q969F9 1004 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 TMEM9BQ9NQ34 198 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 HSPBP1Q9NZL4 362 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 NME7Q9Y5B8 376 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 ADAMTS9Q9P2N4 1935 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 PCNX2A6NKB5 2137 aa22.52■■□□□ 1.2
CD47-202ENST00000361309 FAM208BQ5VWN6 2430 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 IGF2RP11717 2491 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 PROS1P07225 676 aa22.51■■□□□ 1.19
CD47-202ENST00000361309 HNRNPLP14866 589 aaKnown RBP eCLIP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms