RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 HIF1AQ16665 826 aa9□□□□□ -0.97
CD46-206ENST00000360212 PACS1Q6VY07 963 aa9□□□□□ -0.97
CD46-206ENST00000360212 KRT27Q7Z3Y8 459 aa9□□□□□ -0.97
CD46-206ENST00000360212 PEX5LQ8IYB4 626 aa9□□□□□ -0.97
CD46-206ENST00000360212 DCUN1D1Q96GG9 259 aa9□□□□□ -0.97
CD46-206ENST00000360212 KREMEN1Q96MU8 473 aa9□□□□□ -0.97
CD46-206ENST00000360212 C11orf70Q9BRQ4 267 aa9□□□□□ -0.97
CD46-206ENST00000360212 PAIP1Q9H074 479 aaKnown RBP9□□□□□ -0.97
CD46-206ENST00000360212 IFT122Q9HBG6 1241 aa9□□□□□ -0.97
CD46-206ENST00000360212 TOPORSQ9NS56 1045 aaPredicted RBP9□□□□□ -0.97
CD46-206ENST00000360212 TCRBV7S3A2A0A539 114 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 DENND3A2RUS2 1198 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 AVILO75366 819 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CRTAMO95727 393 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CYP19A1P11511 503 aaPredicted RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 TUFMP49411 452 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 SLC5A3P53794 718 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 YWHAGP61981 247 aaKnown RBP eCLIP8.99□□□□□ -0.97
CD46-206ENST00000360212 MRPS22P82650 360 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 MYBPC1Q00872 1141 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 PTK7Q13308 1070 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 KRT72Q14CN4 511 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 PRKD1Q15139 912 aaPredicted RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 EML3Q32P44 896 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CENPUQ71F23 418 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 BANPQ8N9N5 519 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.99□□□□□ -0.97
CD46-206ENST00000360212 PPP1R14CQ8TAE6 165 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SPATA17Q96L03 361 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CEP295NLQ96MC4 621 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 TRIM56Q9BRZ2 755 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 CAAP1Q9H8G2 361 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 COPS7BQ9H9Q2 264 aaPredicted RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 JMJD4Q9H9V9 463 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 TRNAU1APQ9NX07 287 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 RRN3Q9NYV6 651 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 TELO2Q9Y4R8 837 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 AP4B1Q9Y6B7 739 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CAPN14A8MX76 684 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 FBP2O00757 339 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SLC16A3O15427 465 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 CFLARO15519 480 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 DGKIO75912 1065 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 OXSR1O95747 527 aaPredicted RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 AKR1B1P15121 316 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CYP11B1P15538 503 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 FGFR3P22607 806 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SBK1Q52WX2 424 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 LPCAT2Q7L5N7 544 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 TTC30AQ86WT1 665 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ZNF713Q8N859 430 aaPredicted RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 ACSS2Q9NR19 701 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 TRIM17Q9Y577 477 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 MAD1L1Q9Y6D9 718 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ZNF804BA4D1E1 1349 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 MYPNQ86TC9 1320 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 DDX39AO00148 427 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 ATP2A1O14983 1001 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 DNAJA2O60884 412 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ZC3H11AO75152 810 aaKnown RBP eCLIP8.99□□□□□ -0.972e-9■■■■■ 26.8
CD46-206ENST00000360212 CFHP08603 1231 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ZNF76P36508 570 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 EVA1CP58658 441 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 GRM2Q14416 872 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 PSMD6Q15008 389 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 INAQ16352 499 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 HSP90AA5PQ58FG0 334 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 XKR5Q6UX68 686 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ZNF34Q8IZ26 560 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 PPM1NQ8N819 430 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 POMGNT1Q8WZA1 660 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CFAP36Q96G28 342 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 CCT7Q99832 543 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SEMA6AQ9H2E6 1030 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 MAN1C1Q9NR34 630 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 ATAD3AQ9NVI7 634 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SENP1Q9P0U3 644 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 NOCTQ9UK39 431 aaKnown RBP8.99□□□□□ -0.97
CD46-206ENST00000360212 ZBTB21Q9ULJ3 1066 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 SOX13Q9UN79 622 aa8.99□□□□□ -0.97
CD46-206ENST00000360212 GTPBP10A4D1E9 387 aaKnown RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 F5H6K3 240 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 J3QRK9 145 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 NOP56O00567 594 aaKnown RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 COPEO14579 308 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 DNALI1O14645 258 aaPredicted RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 LDHBP07195 334 aaKnown RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 CDH2P19022 906 aaPredicted RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 KLRC2P26717 231 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 HSPA1LP34931 641 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 GMPRP36959 345 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 EIF2B2P49770 351 aaKnown RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 BASP1P80723 227 aaKnown RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 IKQ13123 557 aaPredicted RBP8.98□□□□□ -0.97
CD46-206ENST00000360212 PPP1R18Q6NYC8 613 aa8.98□□□□□ -0.97
CD46-206ENST00000360212 DPP8Q6V1X1 898 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms