RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 LRRC8AQ8IWT6 810 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 TTC9BQ8N6N2 239 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 KREMEN2Q8NCW0 462 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 STK32AQ8WU08 396 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 HDAC7Q8WUI4 952 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 BAG1Q99933 345 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 PDCL3Q9H2J4 239 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 PLEKHA4Q9H4M7 779 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 NHEJ1Q9H9Q4 299 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 CYP4F11Q9HBI6 524 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 ADAMTS1Q9UHI8 967 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 MTCL1Q9Y4B5 1905 aaKnown RBP13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 SPATA31D3P0C874 917 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 GRIK1P39086 918 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 NRIP1P48552 1158 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 RPL34P49207 117 aaKnown RBP13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC8A3P57103 927 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 NOMO3P69849 1222 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 MGAT5BQ3V5L5 792 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 SPATA31D4Q6ZUB0 917 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 VPS36Q86VN1 386 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 CCDC42Q96M95 316 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 PNPLA8Q9NP80 782 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 DMAP1Q9NPF5 467 aaPredicted RBP13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 HCFC2Q9Y5Z7 792 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 PLXNA3P51805 1871 aa13.11□□□□□ -0.31
NIF3L1-201ENST00000359683 A0A087X0T9 212 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 F8VP50 259 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 TNFRSF10AO00220 468 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 TULP2O00295 520 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 PRRG1O14668 218 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 TRIM66O15016 1216 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 FAM228BP0C875 321 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 GZMAP12544 262 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 EPCAMP16422 314 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 DDR2Q16832 855 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 TCEAL5Q5H9L2 206 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SCN4BQ8IWT1 228 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CCDC170Q8IYT3 715 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 ADAMTS19Q8TE59 1207 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 KCTD13Q8WZ19 329 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 HSFY1Q96LI6 401 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 DPP7Q9UHL4 492 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CYTH4Q9UIA0 394 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 NENFQ9UMX5 172 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 MYH10P35580 1976 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 GABBR2O75899 941 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SOAT2O75908 522 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 GPR15P49685 360 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 HYAL1Q12794 435 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC18A3Q16572 532 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 NAA35Q5VZE5 725 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 ACAD10Q6JQN1 1059 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 PMF1Q6P1K2 205 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 TMEM184AQ6ZMB5 413 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CCDC112Q8NEF3 446 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 YIPF1Q9Y548 306 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 INSL5Q9Y5Q6 135 aa13.1□□□□□ -0.31
NIF3L1-201ENST00000359683 SOWAHDA6NJG2 315 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 AKR1B10O60218 316 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 ZMYND10O75800 440 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 PAPLNO95428 1278 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 LCA5LO95447 670 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 PTMAP06454 111 aaKnown RBP13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 C8AP07357 584 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 ATF6P18850 670 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 ALDH1A3P47895 512 aa13.09□□□□□ -0.31
NIF3L1-201ENST00000359683 KIF11P52732 1056 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms