RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PDCL3Q9H2J4 239 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 TRIM66O15016 1216 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 ZMYND10O75800 440 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 ALDH1A3P47895 512 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 DLX2Q07687 328 aaPredicted RBP15.72■□□□□ 0.11
CCNE1-202ENST00000357943 CCDC173Q0VFZ6 552 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 CTC1Q2NKJ3 1217 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 PPM1LQ5SGD2 360 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 CCDC186Q7Z3E2 898 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 C12orf76Q8N812 135 aaPredicted RBP15.72■□□□□ 0.11
CCNE1-202ENST00000357943 HDAC7Q8WUI4 952 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 PDLIM2Q96JY6 352 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 C8orf48Q96LL4 319 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 PPP1R9BQ96SB3 815 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 PCDHB18PQ96TA0 734 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 LHX5Q9H2C1 402 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 SEPT11Q9NVA2 429 aaKnown RBP15.72■□□□□ 0.11
CCNE1-202ENST00000357943 ZNHIT6Q9NWK9 470 aaKnown RBP15.72■□□□□ 0.11
CCNE1-202ENST00000357943 CLDND1Q9NY35 253 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 DPP7Q9UHL4 492 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 CYTH4Q9UIA0 394 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 BZW2Q9Y6E2 419 aaKnown RBP15.72■□□□□ 0.11
CCNE1-202ENST00000357943 PTPRDP23468 1912 aa15.72■□□□□ 0.11
CCNE1-202ENST00000357943 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 HHLA1C9JL84 531 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 XPO1O14980 1071 aaKnown RBP15.71■□□□□ 0.11
CCNE1-202ENST00000357943 TBX10O75333 385 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 LRG1P02750 347 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 SETSIPP0DME0 302 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 SLC8A3P57103 927 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 RPL10AP62906 217 aaKnown RBP15.71■□□□□ 0.11
CCNE1-202ENST00000357943 MTMR3Q13615 1198 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 PMF1Q6P1K2 205 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 GPRIN1Q7Z2K8 1008 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 PIGZQ86VD9 579 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 C1orf131Q8NDD1 294 aaKnown RBP15.71■□□□□ 0.11
CCNE1-202ENST00000357943 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 CLEC1BQ9P126 229 aa15.71■□□□□ 0.11
CCNE1-202ENST00000357943 CCDC195A0A1B0GUA6 201 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 GOLGA6L6A8MZA4 724 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 TNFRSF10BO14763 440 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 CCL16O15467 120 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 CYP1A1P04798 512 aaPredicted RBP15.7■□□□□ 0.1
CCNE1-202ENST00000357943 ANXA13P27216 316 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 LTBRP36941 435 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 PLA2G4AP47712 749 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 RGS7P49802 495 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 COL19A1Q14993 1142 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 EP400NLQ6ZTU2 488 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 RTL10Q7L3V2 364 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 PABPC5Q96DU9 382 aaKnown RBP15.7■□□□□ 0.1
CCNE1-202ENST00000357943 SPATA17Q96L03 361 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 PANX2Q96RD6 677 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 ZDHHC7Q9NXF8 308 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 ADAMTS1Q9UHI8 967 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 CEP83Q9Y592 693 aa15.7■□□□□ 0.1
CCNE1-202ENST00000357943 PIK3R2O00459 728 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 DDX3XO00571 662 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCNE1-202ENST00000357943 UNGP13051 313 aaPredicted RBP15.69■□□□□ 0.1
CCNE1-202ENST00000357943 TNFAIP3P21580 790 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 CDH5P33151 784 aaPredicted RBP15.69■□□□□ 0.1
CCNE1-202ENST00000357943 SLC5A3P53794 718 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 EPHB3P54753 998 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 NOMO3P69849 1222 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 NAA35Q5VZE5 725 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 ANKRD54Q6NXT1 300 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 ELMSAN1Q6PJG2 1045 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 TMC5Q6UXY8 1006 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 DENND5BQ6ZUT9 1274 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 TMEM35BQ8NCS4 154 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 SCAMP5Q8TAC9 235 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 CPA5Q8WXQ8 436 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 ZNF707Q96C28 371 aaPredicted RBP15.69■□□□□ 0.1
CCNE1-202ENST00000357943 APOL5Q9BWW9 433 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 SFXN1Q9H9B4 322 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 PNPLA8Q9NP80 782 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 DZANK1Q9NVP4 752 aa15.69■□□□□ 0.1
CCNE1-202ENST00000357943 NCK2O43639 380 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 GABBR2O75899 941 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 LSM8O95777 96 aaKnown RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 SRGAP2BP0DMP2 458 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 HMGA1P17096 107 aaKnown RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 HOXA9P31269 272 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 EIF4A3P38919 411 aaKnown RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 GSDMDP57764 484 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 USP46P62068 366 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 CDK17Q00537 523 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 IFRD2Q12894 506 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 PDCLQ13371 301 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 PLD1Q13393 1074 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 RAB41Q5JT25 222 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 SYCE2Q6PIF2 218 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 DNAJB7Q7Z6W7 309 aaPredicted RBP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 NUP93Q8N1F7 819 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 SLC30A5Q8TAD4 765 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 PSMG2Q969U7 264 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCNE1-202ENST00000357943 PRKD2Q9BZL6 878 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 UBXN6Q9BZV1 441 aa15.68■□□□□ 0.1
CCNE1-202ENST00000357943 NHEJ1Q9H9Q4 299 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms