RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ATP9AO75110 1047 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 GYS1P13807 737 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 CHRM3P20309 590 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 ZNF772Q68DY9 489 aaPredicted RBP15.38■□□□□ 0.05
CHD4-201ENST00000357008 MOXD1Q6UVY6 613 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 C2orf69Q8N8R5 385 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 DIS3LQ8TF46 1054 aaKnown RBP15.38■□□□□ 0.05
CHD4-201ENST00000357008 CRAMP1Q96RY5 1269 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 SLC38A7Q9NVC3 462 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 GTF2H3Q13889 308 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 UNC45BQ8IWX7 931 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 OR6J1Q8NGC5 347 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 STMN3Q9NZ72 180 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 OTUD4Q01804 1114 aaKnown RBP15.38■□□□□ 0.05
CHD4-201ENST00000357008 OASLQ15646 514 aaKnown RBP15.38■□□□□ 0.05
CHD4-201ENST00000357008 ATXN2LQ8WWM7 1075 aaKnown RBP15.38■□□□□ 0.05
CHD4-201ENST00000357008 C19orf81C9J6K1 198 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.38■□□□□ 0.053e-7■□□□□ 10.6
CHD4-201ENST00000357008 ZNF518BQ9C0D4 1074 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 BRD8Q9H0E9 1235 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 OSGEPQ9NPF4 335 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 QRICH2Q9H0J4 1663 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 PROSCO94903 275 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 PGK2P07205 417 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 CACNA2D1P54289 1103 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 SEMA4AQ9H3S1 761 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 EIF3LQ9Y262 564 aaKnown RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 GNL1P36915 607 aaPredicted RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 GEMP55040 296 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 SGO1Q5FBB7 561 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 LUZP2Q86TE4 346 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 LRRC40Q9H9A6 602 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 NAALADL1Q9UQQ1 740 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 CES2O00748 559 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 PPP3CCP48454 512 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 CEP78Q5JTW2 689 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 RBM46Q8TBY0 533 aaKnown RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 TADA1Q96BN2 335 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 RNF103O00237 685 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 EPHB2P29323 1055 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 DENND5BQ6ZUT9 1274 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 TMPRSS6Q8IU80 811 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 MAML3Q96JK9 1138 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 EPS8L2Q9H6S3 715 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 RUVBL2Q9Y230 463 aaKnown RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 CFAP99D6REC4 459 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 MED24O75448 989 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
CHD4-201ENST00000357008 NMD3Q96D46 503 aaKnown RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 UBE2OQ9C0C9 1292 aaKnown RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 LSM7Q9UK45 103 aaKnown RBP15.37■□□□□ 0.05
CHD4-201ENST00000357008 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
CHD4-201ENST00000357008 KRT87PA6NCN2 255 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 PIK3CDO00329 1044 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 RIPK2O43353 540 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 HMBSP08397 361 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 IMPDH2P12268 514 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 NCAM1P13591 858 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 CASP4P49662 377 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 UGT3A1Q6NUS8 523 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 TUBGCP4Q9UGJ1 667 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 BGNP21810 368 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 RXRBP28702 533 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 MLH1P40692 756 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 SNX17Q15036 470 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 CACHD1Q5VU97 1274 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 MRNIPQ6NTE8 343 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 ZNF333Q96JL9 665 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 APOL5Q9BWW9 433 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 KIAA1257Q9ULG3 409 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 LRCH1Q9Y2L9 728 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 CYTH3O43739 400 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 TOMM70O94826 608 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 GIT2Q14161 759 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 FUT11Q495W5 492 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 SPOCD1Q6ZMY3 1216 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 VWA5AO00534 786 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 WBP4O75554 376 aaKnown RBP15.36■□□□□ 0.05
CHD4-201ENST00000357008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHD4-201ENST00000357008 PPP2R3CQ969Q6 453 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
CHD4-201ENST00000357008 AAR2Q9Y312 384 aaKnown RBP15.36■□□□□ 0.05
CHD4-201ENST00000357008 GH1P01241 217 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 PNPLA4P41247 253 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 SLC34A1Q06495 639 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 TWF1Q12792 350 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 ZRANB3Q5FWF4 1079 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 ZBTB49Q6ZSB9 765 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 CBWD2Q8IUF1 395 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 MUC3BQ9H195 1237 aa15.36■□□□□ 0.05
CHD4-201ENST00000357008 GPR75-ASB3A0A0A6YYF3 556 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 SNUPNO95149 360 aaKnown RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 ASMTLO95671 621 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 SERPIND1P05546 499 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 FCGR1AP12314 374 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 CPA3P15088 417 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 RRM1P23921 792 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 SOX6P35712 828 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms